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The map label for this gene is trkA [H]

Identifier: 167621965

GI number: 167621965

Start: 28246

End: 29655

Strand: Reverse

Name: trkA [H]

Synonym: Shal_0024

Alternate gene names: 167621965

Gene position: 29655-28246 (Counterclockwise)

Preceding gene: 167621966

Following gene: 167621964

Centisome position: 0.57

GC content: 48.58

Gene sequence:

>1410_bases
ATGAAAATTATCATTTTGGGTGCGGGACAAGTTGGTGGCACGTTAGCCGAAAACTTAGTTGGCGAAAACAATGACATCAC
CATTGTCGATCACGACAAAAACCGCCTGCGTAGCTTGCAAGATAAGTACGATTTAAGGGTGGTTGTGGGTCATGGTGCTC
ACCCAAGTGTATTAAAAGAGGCGGGAGCCGAAGACGCAGACATGCTGATCGCGGTGACCAATAGCGACGAATGTAATATG
GCTGCCTGCCAGATTGCCTACTCGCTCTATGGTACTCCCACCAAAATTGCCCGAATTCGTTCAGAACAATATCTAGGTCT
ACGCGACAAACTGTTTATCGATAGCGAAACCAAAAATGCAGACAATCGCCCACGTGGCGGGTTTATTATTGATGAGCTAA
TTGCACCAGAACAGCTAGTCACCGCTTACATCGGCCGTTTAGTTGAATACCCAGGCGCACTGCAGGTGCTTGAATTTGCC
GAGGGCAGACTCAGTTTAGTTGCCGTACGTGCTTACTATGGCGGTCCATTAGTGGGTAACGCATTAGCAGCACTGCGCGA
GCATATGCCCAATATTGATACCCGGGTCGCGGCCATCTTTAGACAAGGTCGACCGATTATGCCTCGCGGCACCACCATTA
TCGAAGCCGATGACGAAGTCTTCTTCGTGGCCGACAGTCGCCATGTGCGTGCGGTAATGAGTGAGATGCAAAAACTGGAT
AACTCCTACCGTAATATCATGATTGCCGGTGGTGGTAATATCGGTTTAGGCCTTGCCAAACAGTTACAACGTAACCATTC
AGTCAAGTTGATTGAACGTAAGCAAGAGCGCGCCGAAGAGTTATCAGAGAGACTAGAAAATACCACGGTATTTTGTGGTG
ACGCCTCAGATCAAGAGTTGCTGCTCGAAGAACATATCGACCAAACCGATGTATTTATTGCCGTGACCAACGACGATGAA
GCTAACATCATGGCCGCCCTGCTTGCTAAGCGCATGGGCGCTAAAAAAGTCATGGTGCTGATTCAGCGTGAAGCCTATGT
TGATATTGTGCAGGAAGCCAATATCGATATCGCCATCTCACCACAGCAAGCCACGATTTCGGCTCTACTGACGCATATTC
GCCAAGGTGATATCTGCAACGTTTACTCACTGCGTCGCGGTGCGGCCGAAGCTATCGAAGCGATTGCTCACGGCGACTCC
AATACCTCAAAGGTCGTTGGTAAGCAGATCAGCGAAATCAAATTACCACCAGGCACAACCATTGGCGCCATTGTGCGCGA
TGAAGAAGTACTCATGGCCCACGATAAAACCGTTATCGAACAAGGCGACCATGTGATCCTCTTCTTGGTAAACAAGAAGT
TTATTGGTGAGGTTGAGAAGCTGTTCCAACCGAGTGCCTTTTTCTTTTAA

Upstream 100 bases:

>100_bases
CAACAAGCTAACCCAGATGATATTGGTTGGCAGATTGTTCCGGGGCAAGACAACATGGACGGCTTTTATTACGCTCGCCT
AGTGAAGGATTAGAACGGCA

Downstream 100 bases:

>100_bases
AAACGTTTAGGAGCGTAATAGTGCTGAACTATCGTCCTTTACTGTTTATTCTGGGAGTTTTCCTGTCGACGCTCACCGCG
TTTATGTTAATTCCTGGAGC

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDHDKNRLRSLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSERLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF

Sequences:

>Translated_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDHDKNRLRSLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSERLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
>Mature_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDHDKNRLRSLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSERLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=469, Percent_Identity=70.362473347548, Blast_Score=678, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 51585; Mature: 51585

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDHDKNRLRSLQDKYDLRVVVGHGAHPSVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMAACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNA
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSERLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSNTSKVVGKQISEIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCE
IGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
EEEEEECCCEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDHDKNRLRSLQDKYDLRVVVGHGAHPSVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMAACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNA
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSERLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSNTSKVVGKQISEIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCE
IGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
EEEEEECCCEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]