| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is aroC
Identifier: 167040678
GI number: 167040678
Start: 2066997
End: 2068049
Strand: Reverse
Name: aroC
Synonym: Teth514_2055
Alternate gene names: 167040678
Gene position: 2068049-2066997 (Counterclockwise)
Preceding gene: 167040679
Following gene: 167040677
Centisome position: 84.16
GC content: 37.13
Gene sequence:
>1053_bases ATGAGGTATATTACTGCAGGTGAATCCCATGGAGAAGCATTAATTGCTGTTATTGAAGGTCTTCCTGCAAATCTTTTAAT AGATGAAGACTTTATAAATAAAGAGCTTAAAAGAAGACAAGGTGGACATGGAAGAGGAAAAAGAATGGCAATTGAAGAGG ACAAAGTCCACGTTTTAAGCGGTGTGAGCAACGGGAAAACAATTGGTTCCCCTCTTGCTATACAGATAATAAACAAAGAT TATGAAAATTGGAAGGGTAAAATAGTTCCAGCTATGACAAGACCTCGCCCTGGTCATGCAGACCTTTCAGGAGCAATAAA ATATAATCAAAGGGATATAAGAAATGTTTTGGAGCGTTCCAGTGCACGAGAAACAGCAGCGCGAGTGGCAGTAGGAAGCG TCGCAAAATTACTTCTCAAGGAGTTAAATATATTCGTAAAAAGTAAAGTTTTAGAAATAGGTGGAATAAGTGTAGAAGAA GAGTGGCCAAAGATTATTGAAGAGGCAAAATCAAAAGGAGATACTTTAGGTGGTGTAATAGAAATAATAATAGAAGGTGT GCCTATTGGATTGGGAAGTCATGTGCAATGGGACAGGAAACTGGATGCTCTTTTAGCTTATCATGTCATGAGTGTACAAG CTATAAAAGGAGTAGAGTTTGGCTTGGGATTTGAAGCAGCAAGAAGACCTGGATCTTTAGTTCACGATGAAATATACTAC GATAAAGAAAGAGGTTTTTATAGAAAATCCAATAATGCAGGAGGAATTGAAGGCGGGATTTCAAATGGAAGTCCTATAAT TATAAAGGCTGCGATGAAGCCAATTCCTACACTTTTAAAACCTCTTAATTCAATTGATATAAATTCAAAGAAACAGGTAA AAGCTGCCTATGAAAGGTCTGATGTAACTGCTGTAGAAGCTGCTGCCTGTGTATTAGAAGCGGTATGCGCTTGGGTGATT GCTGATGAATGCCTTAAAAAGTTTGGTGGTGATTCAATTGAGGAACTAAAGAAAAATTATGATGCTTATTTAGAGTATGT AAAAAATTTCTAG
Upstream 100 bases:
>100_bases TAACAGGTATTGCAAGAATAGTAGTGAGTATTTTGTACTTTTTAGTAGCTAATTATGAAGATGAGATTAAAAAAGTTGAA GCAAAGTAAGGAGGAAAAGT
Downstream 100 bases:
>100_bases ATTTTAAAAATAAAAAGGTAAGCATAAAGTTCGCGAAAAATTTCGGTAGACTAGTTAATAGAGTTGACATTTTGCACAAG ACGAGTGACTTGACAGAGCA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLSGVSNGKTIGSPLAIQIINKD YENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERSSARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEE EWPKIIEEAKSKGDTLGGVIEIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYY DKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERSDVTAVEAAACVLEAVCAWVI ADECLKKFGGDSIEELKKNYDAYLEYVKNF
Sequences:
>Translated_350_residues MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLSGVSNGKTIGSPLAIQIINKD YENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERSSARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEE EWPKIIEEAKSKGDTLGGVIEIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYY DKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERSDVTAVEAAACVLEAVCAWVI ADECLKKFGGDSIEELKKNYDAYLEYVKNF >Mature_350_residues MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLSGVSNGKTIGSPLAIQIINKD YENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERSSARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEE EWPKIIEEAKSKGDTLGGVIEIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYY DKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERSDVTAVEAAACVLEAVCAWVI ADECLKKFGGDSIEELKKNYDAYLEYVKNF
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=348, Percent_Identity=35.3448275862069, Blast_Score=149, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321290, Length=361, Percent_Identity=31.8559556786704, Blast_Score=166, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_THEPX (B0K3V6)
Other databases:
- EMBL: CP000923 - RefSeq: YP_001663663.1 - ProteinModelPortal: B0K3V6 - SMR: B0K3V6 - GeneID: 5876482 - GenomeReviews: CP000923_GR - KEGG: tex:Teth514_2055 - HOGENOM: HBG292336 - OMA: GSEAHDE - ProtClustDB: PRK05382 - BioCyc: TSP1755:TETH514_2055-MONOMER - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 38317; Mature: 38317
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3; PS00464 RIBOSOMAL_L22
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLS CCEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEE GVSNGKTIGSPLAIQIINKDYENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERS CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHH SARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEEEWPKIIEEAKSKGDTLGGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH EIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYY HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHEE DKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERS ECCCCCEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC DVTAVEAAACVLEAVCAWVIADECLKKFGGDSIEELKKNYDAYLEYVKNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYITAGESHGEALIAVIEGLPANLLIDEDFINKELKRRQGGHGRGKRMAIEEDKVHVLS CCEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEE GVSNGKTIGSPLAIQIINKDYENWKGKIVPAMTRPRPGHADLSGAIKYNQRDIRNVLERS CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHH SARETAARVAVGSVAKLLLKELNIFVKSKVLEIGGISVEEEWPKIIEEAKSKGDTLGGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH EIIIEGVPIGLGSHVQWDRKLDALLAYHVMSVQAIKGVEFGLGFEAARRPGSLVHDEIYY HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHEE DKERGFYRKSNNAGGIEGGISNGSPIIIKAAMKPIPTLLKPLNSIDINSKKQVKAAYERS ECCCCCEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC DVTAVEAAACVLEAVCAWVIADECLKKFGGDSIEELKKNYDAYLEYVKNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA