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The map label for this gene is infC [H]

Identifier: 167040677

GI number: 167040677

Start: 2066185

End: 2066643

Strand: Reverse

Name: infC [H]

Synonym: Teth514_2054

Alternate gene names: 167040677

Gene position: 2066643-2066185 (Counterclockwise)

Preceding gene: 167040678

Following gene: 167040676

Centisome position: 84.1

GC content: 36.38

Gene sequence:

>459_bases
TTGATAGACCAAGATGGAAAGCAAATTGGCATAATGTCGGCAAAGGAAGCTTATAAAATTGCTCAAGAGCGACATCTTGA
TTTGGTTAAGATTGCCCCTCAAGCCAATCCGCCCGTGTGCAAATTGATGGATTTTGGTAAGTACAGGTACGAGCTTAGTA
AGAGGGAGAAAGAGGCAAAGAAAAAGCAAAAGGTGATAAATGTTAAAGAAATAAGAATGTCTCCAAATATTGAAGATCAT
GATTTTGGAGTAAAGTTGAGAAGTGCTATTAAATTTTTAAAAGAAGGTGACAAGGTAAAAGTTACTATAAGATTTAGAGG
AAGAGAAGCTGTTCATACTTCACTGGCAGAAGACCTTTTAAAGAGGTTTGCAGAAGAGCTTGATGAGTATGGCGCTATAG
AAAAAGCTCCTAATATGGAGGGTAGGAATTTAATAATGGTATTAACACCAAGAAAATAG

Upstream 100 bases:

>100_bases
TTTCTATATCCGCTTTTATTTTTTCATAATTCTTAGGAGGTGTGTATTTATTAACAAAGAGCTGCAGGTCAATGAGGAAA
TAAGAGACAAAGAGGTAAGG

Downstream 100 bases:

>100_bases
TAACAATTACAGAAGGAGGATATATTTATGCCTAAAATGAAAACACATAGAGGAGCAGCAAAAAGGTTCAAAGTATTAAA
GTCAGGAAAAGTTAAAAGGT

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIEDH
DFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK

Sequences:

>Translated_152_residues
MIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIEDH
DFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK
>Mature_152_residues
MIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIEDH
DFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=149, Percent_Identity=52.3489932885906, Blast_Score=144, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 17541; Mature: 17541

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAK
CCCCCCCEECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHH
KKQKVINVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLL
HHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
KRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIDQDGKQIGIMSAKEAYKIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAK
CCCCCCCEECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHH
KKQKVINVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLL
HHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
KRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]