| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yesM [H]
Identifier: 167040588
GI number: 167040588
Start: 1968980
End: 1970224
Strand: Reverse
Name: yesM [H]
Synonym: Teth514_1959
Alternate gene names: 167040588
Gene position: 1970224-1968980 (Counterclockwise)
Preceding gene: 167040589
Following gene: 167040587
Centisome position: 80.18
GC content: 33.9
Gene sequence:
>1245_bases ATGGGAGAAGTTAAGTTAAGAGATGTAATTGACGTAAAAAAAGTAGAAGAAATATTACAAAATTTCTCGGATGTTACAGG ACTTGGTGCCATTATCGCAACACCAGATGGAGAAAGTATTACAAAACCTAGTAATTTTACAGAACATTGTTTACTCGTAA GAGATACTTTGCATGGAAAAAAAGGGTGTTTTAGATCTGATGCAGAATTAGGTAGGCTTTCTTTACAAAAAGGGGGGGTA GCTATTTCACTTTGCCATTGTGAGATAATTGACTTGGCAGCTCCATTACTGGTAGATGGGAAATGTTGGGGATATGTATT ATGTGGACAAGTATTTTTATCTCCTCCTACAGAAGAAATGGTTAAAAGAGCAATAGATCGGGCAAAGAATTTCGGCATAG CTCCTGAAGTATATCTTGAAAAATTTTTAAAGATAAAAGTAGTGCCCCAAGATTACATTATAGCAGCTGGGAATATGCTC CAGATTATTGCTAGTTACTTAATAGAACTTGGCCTTAATAAACTTATGCAAGAAAAACTTCTTGAGGAAACTAAACGGAG GTCCGAATATGAAAATATTATTAAAAGTTTAGAGCTAAAAACTCTTCAGTCTCAAGTAAATCCTCATTTTTTATTCAATA CCCTCAATACGGCTGCTCGATTAGCCTATTTAGAAAATGCGCCACGAACAGCGGAAATTATCTATTCTCTTGCTAGTCTT CTTAGGTATTCACTTCGAAATCTAGATCAACTTGTTGCCTTAAAAGAAGAGATATCGTACTTAAAACACTACCTTCATAT CCAAGAAATAAGATATAAAGACCATATAAAATCGCAAATTGATGTTCCAACTGAAATCGAAAACGTACTTCTTCCGGTCA TGAGTCTACAACCCATAGTAGAAAATGCTATAATTCACGGTCTGGAAGAAAAAGAAGAAGGGGGAGTAATTAATATAAAA GCTTATCAAAAGGATGAAACAATATTCATTGAAGTAAAGGACAATGGAGTGGGAATAGATAAGAAAATGCTTGAAGTAAT TAAGAATGATATCGAAAAAGGTAAAGGACATACAACGGCACTAGGCCTACAAAATGTTGATAGACGAATAAAAATGTACT TTGGAAAAGAATATGGGTTAGAAATAAGGAGCGAAAAAGGAAATGGCACTTTAGTTGTTTTAAAAATACCGATAATTAAG AAAGAGGTGGGAAAATATAATGAAATACAAAGCAATGATTTGTGA
Upstream 100 bases:
>100_bases GTATAATTATTTATCTTAGCAGAAGGGAAGAGAACACTGATGAATTTTGTGGTGTTTGCAATTTAGATAATACCTATTTT GAGGCGAGAAGGTGAGAAAA
Downstream 100 bases:
>100_bases TGATGAGCCTTTAGAAAGAGAAGTACTTTCTATGATTGTTGATAAAACAGGTTTGCCAATTGAAGTAATATGCGATGCCA AAAATGGAAATGATGCAATT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MGEVKLRDVIDVKKVEEILQNFSDVTGLGAIIATPDGESITKPSNFTEHCLLVRDTLHGKKGCFRSDAELGRLSLQKGGV AISLCHCEIIDLAAPLLVDGKCWGYVLCGQVFLSPPTEEMVKRAIDRAKNFGIAPEVYLEKFLKIKVVPQDYIIAAGNML QIIASYLIELGLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRTAEIIYSLASL LRYSLRNLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENVLLPVMSLQPIVENAIIHGLEEKEEGGVINIK AYQKDETIFIEVKDNGVGIDKKMLEVIKNDIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIK KEVGKYNEIQSNDL
Sequences:
>Translated_414_residues MGEVKLRDVIDVKKVEEILQNFSDVTGLGAIIATPDGESITKPSNFTEHCLLVRDTLHGKKGCFRSDAELGRLSLQKGGV AISLCHCEIIDLAAPLLVDGKCWGYVLCGQVFLSPPTEEMVKRAIDRAKNFGIAPEVYLEKFLKIKVVPQDYIIAAGNML QIIASYLIELGLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRTAEIIYSLASL LRYSLRNLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENVLLPVMSLQPIVENAIIHGLEEKEEGGVINIK AYQKDETIFIEVKDNGVGIDKKMLEVIKNDIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIK KEVGKYNEIQSNDL >Mature_413_residues GEVKLRDVIDVKKVEEILQNFSDVTGLGAIIATPDGESITKPSNFTEHCLLVRDTLHGKKGCFRSDAELGRLSLQKGGVA ISLCHCEIIDLAAPLLVDGKCWGYVLCGQVFLSPPTEEMVKRAIDRAKNFGIAPEVYLEKFLKIKVVPQDYIIAAGNMLQ IIASYLIELGLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRTAEIIYSLASLL RYSLRNLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENVLLPVMSLQPIVENAIIHGLEEKEEGGVINIKA YQKDETIFIEVKDNGVGIDKKMLEVIKNDIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIKK EVGKYNEIQSNDL
Specific function: Member of the two-component regulatory system yesM/yesN. Probably activates yesN by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788446, Length=227, Percent_Identity=29.0748898678414, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1788723, Length=232, Percent_Identity=33.1896551724138, Blast_Score=121, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR010559 - InterPro: IPR005467 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46687; Mature: 46556
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVKLRDVIDVKKVEEILQNFSDVTGLGAIIATPDGESITKPSNFTEHCLLVRDTLHGK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC KGCFRSDAELGRLSLQKGGVAISLCHCEIIDLAAPLLVDGKCWGYVLCGQVFLSPPTEEM CCCCCCCCHHHHHEEECCCEEEEEEHHHHHHHHCCCEECCCCHHHHHCCHHHCCCCHHHH VKRAIDRAKNFGIAPEVYLEKFLKIKVVPQDYIIAAGNMLQIIASYLIELGLNKLMQEKL HHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH LEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRTAEIIYSLASL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LRYSLRNLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENVLLPVMSLQPIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ENAIIHGLEEKEEGGVINIKAYQKDETIFIEVKDNGVGIDKKMLEVIKNDIEKGKGHTTA HHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEE LGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIKKEVGKYNEIQSNDL ECHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECHHHHHCCCCCCCCCCCC >Mature Secondary Structure GEVKLRDVIDVKKVEEILQNFSDVTGLGAIIATPDGESITKPSNFTEHCLLVRDTLHGK CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC KGCFRSDAELGRLSLQKGGVAISLCHCEIIDLAAPLLVDGKCWGYVLCGQVFLSPPTEEM CCCCCCCCHHHHHEEECCCEEEEEEHHHHHHHHCCCEECCCCHHHHHCCHHHCCCCHHHH VKRAIDRAKNFGIAPEVYLEKFLKIKVVPQDYIIAAGNMLQIIASYLIELGLNKLMQEKL HHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH LEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRTAEIIYSLASL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LRYSLRNLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENVLLPVMSLQPIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ENAIIHGLEEKEEGGVINIKAYQKDETIFIEVKDNGVGIDKKMLEVIKNDIEKGKGHTTA HHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEE LGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIKKEVGKYNEIQSNDL ECHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]