Click here to switch to the map view.

The map label for this gene is 167040156

Identifier: 167040156

GI number: 167040156

Start: 1545979

End: 1546857

Strand: Direct

Name: 167040156

Synonym: Teth514_1518

Alternate gene names: NA

Gene position: 1545979-1546857 (Clockwise)

Preceding gene: 167040155

Following gene: 167040157

Centisome position: 62.91

GC content: 36.52

Gene sequence:

>879_bases
ATGAGAGGATTGGCTATAAAATTTGGACCATCTGGGAATTCTGATAGTTTCTACAAAGAAGGGCATAAATCTTCTTTAGA
AATGCCTGAATGGCTCCATAACATGGGGCTTGATGCGTATGAATATTCTTTTTCAAGGGGAATAAAAATTAGCGAAAAGA
TGGCTAAGGAGCTTAAGGAAGGGGCACAAAAATTCAACATAACTATTACTGTTCATGCTCCTTATTACATAAACTTAGCT
ACTACGGATAAAACCAAAATGGAGAATTCCAAGAGATACTTAATAGATAGTTTAATTGCAGGAAAATGGATGGGGGCTAA
AAGGGTAACTTTTCATCCTGGTTCGGGAGCAGAAGGGACGAGAAAAGAGGCTTTAGAGAGAGCAAAAAAACTTTTAAAGG
AAATTTTAAAAGAGATAGAGGACAAAGGACTTACTGACATAACCCTATGTCCAGAGACAATGGGAAAGAAAAACCAATTG
GGTACTTTAGAAGAAGTATTGGAGCTGTGTAATGTGGATAAGAGAATTATTCCCACTATAGACTTTGCCCATTTACATGC
AAGAGATAATGGAAGGTTTAAGTCTATAGAAGATTATGCAGAGGTTTTGGATATTATTGAAAGGTATTTGGGAAAAGAAA
GGGCGAAAAAGATACACGTCCATTTTAGTAGAATTGAATACACAGATCAGGGAGAAAAAAGGCATTGGACACTGAAAGAC
ACTCAATACGGGCCAGAATTTGAGCCTTTGGCACAGCTTTTCTATGAAAGAAAGATGGAGCCTATTGTCATATGTGAATC
GAGAGGAACTATGGCAGAAGATGCTTTAAAACTAAAAGAGATATATCTAAATATTGCAAAAAGGATGTCGAAAGTATGA

Upstream 100 bases:

>100_bases
CTTTTTATAGGTTTGCCGACTATACTATTGATGTATCCGATATGACAATAGATGAAGTAGCAGAGGAAGTTATAAAGGCT
TACATTAGACTTAAGAAAGG

Downstream 100 bases:

>100_bases
GAATTGTAGTAAAAGTTGGTACAAGCACTTTGACATATGAAAATGGTAAATTGAATTTAGAAATAATGGAGAAGTTAGTA
AGGCAAATTGCTAATTTATT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRGLAIKFGPSGNSDSFYKEGHKSSLEMPEWLHNMGLDAYEYSFSRGIKISEKMAKELKEGAQKFNITITVHAPYYINLA
TTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGAEGTRKEALERAKKLLKEILKEIEDKGLTDITLCPETMGKKNQL
GTLEEVLELCNVDKRIIPTIDFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKD
TQYGPEFEPLAQLFYERKMEPIVICESRGTMAEDALKLKEIYLNIAKRMSKV

Sequences:

>Translated_292_residues
MRGLAIKFGPSGNSDSFYKEGHKSSLEMPEWLHNMGLDAYEYSFSRGIKISEKMAKELKEGAQKFNITITVHAPYYINLA
TTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGAEGTRKEALERAKKLLKEILKEIEDKGLTDITLCPETMGKKNQL
GTLEEVLELCNVDKRIIPTIDFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKD
TQYGPEFEPLAQLFYERKMEPIVICESRGTMAEDALKLKEIYLNIAKRMSKV
>Mature_292_residues
MRGLAIKFGPSGNSDSFYKEGHKSSLEMPEWLHNMGLDAYEYSFSRGIKISEKMAKELKEGAQKFNITITVHAPYYINLA
TTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGAEGTRKEALERAKKLLKEILKEIEDKGLTDITLCPETMGKKNQL
GTLEEVLELCNVDKRIIPTIDFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKD
TQYGPEFEPLAQLFYERKMEPIVICESRGTMAEDALKLKEIYLNIAKRMSKV

Specific function: Unknown

COG id: COG0648

COG function: function code L; Endonuclease IV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001719
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 3.1.21.2

Molecular weight: Translated: 33613; Mature: 33613

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLAIKFGPSGNSDSFYKEGHKSSLEMPEWLHNMGLDAYEYSFSRGIKISEKMAKELKE
CCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GAQKFNITITVHAPYYINLATTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGAEGT
HHHHEEEEEEEECCEEEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCH
RKEALERAKKLLKEILKEIEDKGLTDITLCPETMGKKNQLGTLEEVLELCNVDKRIIPTI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC
DFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKD
CHHEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEEEEEEECCCCCCEEEEECC
TQYGPEFEPLAQLFYERKMEPIVICESRGTMAEDALKLKEIYLNIAKRMSKV
CCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGLAIKFGPSGNSDSFYKEGHKSSLEMPEWLHNMGLDAYEYSFSRGIKISEKMAKELKE
CCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GAQKFNITITVHAPYYINLATTDKTKMENSKRYLIDSLIAGKWMGAKRVTFHPGSGAEGT
HHHHEEEEEEEECCEEEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCH
RKEALERAKKLLKEILKEIEDKGLTDITLCPETMGKKNQLGTLEEVLELCNVDKRIIPTI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC
DFAHLHARDNGRFKSIEDYAEVLDIIERYLGKERAKKIHVHFSRIEYTDQGEKRHWTLKD
CHHEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEEEEEEECCCCCCEEEEECC
TQYGPEFEPLAQLFYERKMEPIVICESRGTMAEDALKLKEIYLNIAKRMSKV
CCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]