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The map label for this gene is ycbL [C]

Identifier: 167040108

GI number: 167040108

Start: 1503731

End: 1504363

Strand: Direct

Name: ycbL [C]

Synonym: Teth514_1470

Alternate gene names: 167040108

Gene position: 1503731-1504363 (Clockwise)

Preceding gene: 167040107

Following gene: 167040110

Centisome position: 61.2

GC content: 34.28

Gene sequence:

>633_bases
ATGAAAATACAAAGGTATGTGGTAGGACTTTATGGAGCCAATTGCTATATTGTTTCTGACGAAGAAGAGAGGGAAGCAAT
TGTAATAGACCCAGGGGAATATTCATCTGAAATACAAGATTATATTGTTACTAACAATTTAAATGTAAAATATATTTTAC
TCACACATGGGCATTTTGATCACATAGGTGGAGTAGAAGAGCTGAAAAAACTAACTCAAGCAAGCGTTGCCATTTCAAAA
GAAGACGCTCCTATGCTTTTAGACCCTAGTTTAAACTTATCTGAAATGGTCTATAAAAAAATACTATGCAATCCTGCAGA
TATTTTATTAAGTGACGGTGATACTCTATATTTTGGAAAATACAAAGTAGAAATCCTACACACTCCAGGACACACAAAGG
GTGGAGTGTGTTTTAAAATTGATAACGTCTGTTTTACAGGAGATACTCTTTTTAAAGACTCAATAGGAAGACACGATTTT
CCTGGAGGAGATTTTTCTACTTTAAGGGACTCTATAAAAAATAAGCTTTTAGTTTTAGGAAATGATGTTACAATATACCC
CGGTCATGGGGACTCTTCAACTATTGGCAAAGAAAAGAGACTTAATCTGTTTTTGAGGGATTTGATGGAGTGA

Upstream 100 bases:

>100_bases
AAAACAGGTAAATTTCAGGCCATGATGAAAGTATTAATTGAAAATGACGGGCCTGTTACTATACTTATTGATTCTAAAAA
AATATTTTAGGAGTGAGTTT

Downstream 100 bases:

>100_bases
AAAAGCAAGAGGACCTTCAAAATTATAGTTCTTCTTTAATTTTTTGCAATATGCTTTTTAATGTTTCTATTTCTTGGGGA
GAGAGTTTTTCAAAAATTGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKIQRYVVGLYGANCYIVSDEEEREAIVIDPGEYSSEIQDYIVTNNLNVKYILLTHGHFDHIGGVEELKKLTQASVAISK
EDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYFGKYKVEILHTPGHTKGGVCFKIDNVCFTGDTLFKDSIGRHDF
PGGDFSTLRDSIKNKLLVLGNDVTIYPGHGDSSTIGKEKRLNLFLRDLME

Sequences:

>Translated_210_residues
MKIQRYVVGLYGANCYIVSDEEEREAIVIDPGEYSSEIQDYIVTNNLNVKYILLTHGHFDHIGGVEELKKLTQASVAISK
EDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYFGKYKVEILHTPGHTKGGVCFKIDNVCFTGDTLFKDSIGRHDF
PGGDFSTLRDSIKNKLLVLGNDVTIYPGHGDSSTIGKEKRLNLFLRDLME
>Mature_210_residues
MKIQRYVVGLYGANCYIVSDEEEREAIVIDPGEYSSEIQDYIVTNNLNVKYILLTHGHFDHIGGVEELKKLTQASVAISK
EDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYFGKYKVEILHTPGHTKGGVCFKIDNVCFTGDTLFKDSIGRHDF
PGGDFSTLRDSIKNKLLVLGNDVTIYPGHGDSSTIGKEKRLNLFLRDLME

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=194, Percent_Identity=32.9896907216495, Blast_Score=95, Evalue=4e-20,
Organism=Homo sapiens, GI21703352, Length=216, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI116642887, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=8e-12,
Organism=Escherichia coli, GI1787158, Length=207, Percent_Identity=39.6135265700483, Blast_Score=138, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17538952, Length=197, Percent_Identity=33.502538071066, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320478, Length=186, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221330176, Length=194, Percent_Identity=31.4432989690722, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24667703, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356335, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24667711, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23450; Mature: 23450

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQRYVVGLYGANCYIVSDEEEREAIVIDPGEYSSEIQDYIVTNNLNVKYILLTHGHFD
CCCEEEEEEEECCEEEEECCCCCCCEEEECCCCCHHHHHHEEEECCCCEEEEEEECCCCC
HIGGVEELKKLTQASVAISKEDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYFGK
CCCCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHEEEECCCEEEEEE
YKVEILHTPGHTKGGVCFKIDNVCFTGDTLFKDSIGRHDFPGGDFSTLRDSIKNKLLVLG
EEEEEEECCCCCCCCEEEEECCEEEECCCHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEE
NDVTIYPGHGDSSTIGKEKRLNLFLRDLME
CCEEEECCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIQRYVVGLYGANCYIVSDEEEREAIVIDPGEYSSEIQDYIVTNNLNVKYILLTHGHFD
CCCEEEEEEEECCEEEEECCCCCCCEEEECCCCCHHHHHHEEEECCCCEEEEEEECCCCC
HIGGVEELKKLTQASVAISKEDAPMLLDPSLNLSEMVYKKILCNPADILLSDGDTLYFGK
CCCCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHEEEECCCEEEEEE
YKVEILHTPGHTKGGVCFKIDNVCFTGDTLFKDSIGRHDFPGGDFSTLRDSIKNKLLVLG
EEEEEEECCCCCCCCEEEEECCEEEECCCHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEE
NDVTIYPGHGDSSTIGKEKRLNLFLRDLME
CCEEEECCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]