| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is dtd [H]
Identifier: 167040107
GI number: 167040107
Start: 1503271
End: 1503720
Strand: Direct
Name: dtd [H]
Synonym: Teth514_1469
Alternate gene names: 167040107
Gene position: 1503271-1503720 (Clockwise)
Preceding gene: 167040106
Following gene: 167040108
Centisome position: 61.18
GC content: 34.44
Gene sequence:
>450_bases TTGAGAGCTGTTGTTCAAAGAGTGATTCGCGGAGAAGTAAGTGTAGATGGAGAAGTAATAAGTTCAATAGGGAAAGGATT TGTTGTTTTGGTTGGCATATCTGTTGATGATAATGAAAATGACGTAATGTACATGGCGGATAAAATAGTAAATTTACGTG TTTTTGAGGATGAAGAAGGAAAAATGAATTTGTCGCTTTTGGATATAGGAGGAGAAGTTTTGCTCGTCTCTCAATTTACT TTGCTGGGAGATGTGAGAAAAGGCAGAAGGCCTAATTTTATGATGGCTCAAAAGCCGGAAGAGGCTTTGAAGTATTTTAA TTTATTAGTAAATGAGATTGAAAAAAGAGGTGTGAGTGTCAAAACAGGTAAATTTCAGGCCATGATGAAAGTATTAATTG AAAATGACGGGCCTGTTACTATACTTATTGATTCTAAAAAAATATTTTAG
Upstream 100 bases:
>100_bases AGATTATTTCAAAAGAGCAACTGGAAAAAGTTATGAATAAGTTAAAAGCTTTGGAAGGAGTAATGGATGTTTACCGATTA AGTGCATAGAGGTGATTTTT
Downstream 100 bases:
>100_bases GAGTGAGTTTATGAAAATACAAAGGTATGTGGTAGGACTTTATGGAGCCAATTGCTATATTGTTTCTGACGAAGAAGAGA GGGAAGCAATTGTAATAGAC
Product: D-tyrosyl-tRNA(Tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF
Sequences:
>Translated_149_residues MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF >Mature_149_residues MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=148, Percent_Identity=49.3243243243243, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI1790320, Length=143, Percent_Identity=41.2587412587413, Blast_Score=127, Evalue=2e-31, Organism=Caenorhabditis elegans, GI115533292, Length=150, Percent_Identity=46.6666666666667, Blast_Score=122, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6319982, Length=150, Percent_Identity=40.6666666666667, Blast_Score=111, Evalue=4e-26, Organism=Drosophila melanogaster, GI281361569, Length=147, Percent_Identity=46.2585034013605, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 16637; Mature: 16637
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEG CHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCC KMNLSLLDIGGEVLLVSQFTLLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSV CEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEE KTGKFQAMMKVLIENDGPVTILIDSKKIF ECHHHHHHHHHHCCCCCCEEEEECCCCCC >Mature Secondary Structure MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEG CHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCC KMNLSLLDIGGEVLLVSQFTLLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSV CEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEE KTGKFQAMMKVLIENDGPVTILIDSKKIF ECHHHHHHHHHHCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA