Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is dtd [H]

Identifier: 167040107

GI number: 167040107

Start: 1503271

End: 1503720

Strand: Direct

Name: dtd [H]

Synonym: Teth514_1469

Alternate gene names: 167040107

Gene position: 1503271-1503720 (Clockwise)

Preceding gene: 167040106

Following gene: 167040108

Centisome position: 61.18

GC content: 34.44

Gene sequence:

>450_bases
TTGAGAGCTGTTGTTCAAAGAGTGATTCGCGGAGAAGTAAGTGTAGATGGAGAAGTAATAAGTTCAATAGGGAAAGGATT
TGTTGTTTTGGTTGGCATATCTGTTGATGATAATGAAAATGACGTAATGTACATGGCGGATAAAATAGTAAATTTACGTG
TTTTTGAGGATGAAGAAGGAAAAATGAATTTGTCGCTTTTGGATATAGGAGGAGAAGTTTTGCTCGTCTCTCAATTTACT
TTGCTGGGAGATGTGAGAAAAGGCAGAAGGCCTAATTTTATGATGGCTCAAAAGCCGGAAGAGGCTTTGAAGTATTTTAA
TTTATTAGTAAATGAGATTGAAAAAAGAGGTGTGAGTGTCAAAACAGGTAAATTTCAGGCCATGATGAAAGTATTAATTG
AAAATGACGGGCCTGTTACTATACTTATTGATTCTAAAAAAATATTTTAG

Upstream 100 bases:

>100_bases
AGATTATTTCAAAAGAGCAACTGGAAAAAGTTATGAATAAGTTAAAAGCTTTGGAAGGAGTAATGGATGTTTACCGATTA
AGTGCATAGAGGTGATTTTT

Downstream 100 bases:

>100_bases
GAGTGAGTTTATGAAAATACAAAGGTATGTGGTAGGACTTTATGGAGCCAATTGCTATATTGTTTCTGACGAAGAAGAGA
GGGAAGCAATTGTAATAGAC

Product: D-tyrosyl-tRNA(Tyr) deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT
LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF

Sequences:

>Translated_149_residues
MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT
LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF
>Mature_149_residues
MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEGKMNLSLLDIGGEVLLVSQFT
LLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSVKTGKFQAMMKVLIENDGPVTILIDSKKIF

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]

COG id: COG1490

COG function: function code J; D-Tyr-tRNAtyr deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTD family [H]

Homologues:

Organism=Homo sapiens, GI30795227, Length=148, Percent_Identity=49.3243243243243, Blast_Score=134, Evalue=3e-32,
Organism=Escherichia coli, GI1790320, Length=143, Percent_Identity=41.2587412587413, Blast_Score=127, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI115533292, Length=150, Percent_Identity=46.6666666666667, Blast_Score=122, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6319982, Length=150, Percent_Identity=40.6666666666667, Blast_Score=111, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281361569, Length=147, Percent_Identity=46.2585034013605, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003732 [H]

Pfam domain/function: PF02580 Tyr_Deacylase [H]

EC number: NA

Molecular weight: Translated: 16637; Mature: 16637

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEG
CHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCC
KMNLSLLDIGGEVLLVSQFTLLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSV
CEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEE
KTGKFQAMMKVLIENDGPVTILIDSKKIF
ECHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRAVVQRVIRGEVSVDGEVISSIGKGFVVLVGISVDDNENDVMYMADKIVNLRVFEDEEG
CHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCC
KMNLSLLDIGGEVLLVSQFTLLGDVRKGRRPNFMMAQKPEEALKYFNLLVNEIEKRGVSV
CEEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEE
KTGKFQAMMKVLIENDGPVTILIDSKKIF
ECHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA