| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is cbiX [H]
Identifier: 167038974
GI number: 167038974
Start: 324870
End: 325235
Strand: Direct
Name: cbiX [H]
Synonym: Teth514_0307
Alternate gene names: 167038974
Gene position: 324870-325235 (Clockwise)
Preceding gene: 167038973
Following gene: 167038975
Centisome position: 13.22
GC content: 31.97
Gene sequence:
>366_bases ATGGGAAAAGGATTATTAATAATAGCACATGGAAGTCGTGTTGAAGAAACGAGGGAAGCAGTATACCAAGTTATAAATAA AATAAAGAGCTTCAAAATATACAAAGACGTAAAAGCAGGTTTTATGGAATTTAACCAGCCTGATATATCTACTTCCATAA GAGAATTTGTCGAAGAAGGAATTTACGATATCATAGCAGTTCCTATGTTTTTATTTGAAGGAAACCATGTGTTACATGAT ATACCTGAGGTTTTTGGAAAAGAAAAAGAAAAATATCCGGGTTTAAAGATTAAGTTTGCAAAGTCTATAGGGTATGATGA CAGAATCGTAGACATAATACTTGAAAGAGCAAAAGAGGTAGAATAA
Upstream 100 bases:
>100_bases GGTATGACTGGGGATACTCTCGGTGCAGTAAATGAATTGGCAGAGCTTACTGCACTCATTTGCTTTGTAAGTGTGTCATT ATAAAAAAGGAGAGATTTTT
Downstream 100 bases:
>100_bases AAGTTTACCTTATGGGAAAGGGTTGTTTTTTATGAATTATATAACTGACCCTAAAGAGATTGAGAAGAGAAGTTTTGAAA TAATAAGTAAAAATATTGAC
Product: cobalamin (vitamin B12) biosynthesis CbiX protein
Products: NA
Alternate protein names: CbiXS [H]
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGKGLLIIAHGSRVEETREAVYQVINKIKSFKIYKDVKAGFMEFNQPDISTSIREFVEEGIYDIIAVPMFLFEGNHVLHD IPEVFGKEKEKYPGLKIKFAKSIGYDDRIVDIILERAKEVE
Sequences:
>Translated_121_residues MGKGLLIIAHGSRVEETREAVYQVINKIKSFKIYKDVKAGFMEFNQPDISTSIREFVEEGIYDIIAVPMFLFEGNHVLHD IPEVFGKEKEKYPGLKIKFAKSIGYDDRIVDIILERAKEVE >Mature_120_residues GKGLLIIAHGSRVEETREAVYQVINKIKSFKIYKDVKAGFMEFNQPDISTSIREFVEEGIYDIIAVPMFLFEGNHVLHDI PEVFGKEKEKYPGLKIKFAKSIGYDDRIVDIILERAKEVE
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002762 [H]
Pfam domain/function: PF01903 CbiX [H]
EC number: =4.99.1.3 [H]
Molecular weight: Translated: 13922; Mature: 13791
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKGLLIIAHGSRVEETREAVYQVINKIKSFKIYKDVKAGFMEFNQPDISTSIREFVEEG CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IYDIIAVPMFLFEGNHVLHDIPEVFGKEKEKYPGLKIKFAKSIGYDDRIVDIILERAKEV HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCC E C >Mature Secondary Structure GKGLLIIAHGSRVEETREAVYQVINKIKSFKIYKDVKAGFMEFNQPDISTSIREFVEEG CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IYDIIAVPMFLFEGNHVLHDIPEVFGKEKEKYPGLKIKFAKSIGYDDRIVDIILERAKEV HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA