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The map label for this gene is ybbM [H]

Identifier: 167038922

GI number: 167038922

Start: 268184

End: 268939

Strand: Direct

Name: ybbM [H]

Synonym: Teth514_0254

Alternate gene names: 167038922

Gene position: 268184-268939 (Clockwise)

Preceding gene: 167038921

Following gene: 167038923

Centisome position: 10.91

GC content: 36.24

Gene sequence:

>756_bases
ATGAGTGTATTGTCTTTGACATTGGCGTCAAGTCTTGTGCTAATATCAATTTTTGTTTCTTATTACCAAAAACTGGGGAT
TGAAAAGGAAATAGTTATAGGTACTATAAGAGCGGTTGTGCAGCTTACAATAGTGGGATACATTTTACACTACATATTTG
CTGCCGATAATGCTTTATTTACCTTGGCAATGGTAAGCTTAATGATAGTAGTTGCTGGAAATAATGCTTCAAAGAGAGGG
AAGGGAATACCGAATGTTTTTTATTTTATCACTTTTTCAATTGCCTTAAGTGCCGCGATTACAATTTCTCTGCTTATTTT
GTTTGGGAATATACATTTTAGACCCCAGGAAGTTATACCTGTATCAGGAATGATAATAGGAAATTCAATGGTGGCTTCAG
GACTTGCTGTTTCAAGGCTAAAAGACGAAATAAAAAATAAGTCAGAGGAAATAGAGGCGTATTTGTCACTTGGTGCAACT
TCAAGGCAAGCCGCACAAAAAGTGATAAAGACTGCAATAAAGACAGGTATGATTCCTACAGTTGACAGTATGAAAACTCT
TGGTATCGTCCAACTTCCAGGGATGATGACAGGTCTCATATTGGGAGGAGTGGACCCTATTGAGGCAGTTAAATATCAGA
TAATGGTTACATTTATGTTAGCCTCTACAGTAGCGATTTCCTGTTTTAGTGTTACCTTTCTTACATACAGAAACTTTTTT
ACAAAGTACCATCAACTTGTGTCTGATTTACAATAA

Upstream 100 bases:

>100_bases
GATATTAGTAGAATATGCAAAAACTTATGATTTTTTTACAAATCCCCAAAATGAAATTACAAAATTGTTTATACAAAGCA
AGTTAAAGGAGGAAGGTTAA

Downstream 100 bases:

>100_bases
TATTGTTTAAAATGATATTGCATTTATTTCTATTTTGTAATAAAATAATGTACAAATCAATTTGTAAATGCAATGAAGTG
GAGCAGTAGGCATTGTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSVLSLTLASSLVLISIFVSYYQKLGIEKEIVIGTIRAVVQLTIVGYILHYIFAADNALFTLAMVSLMIVVAGNNASKRG
KGIPNVFYFITFSIALSAAITISLLILFGNIHFRPQEVIPVSGMIIGNSMVASGLAVSRLKDEIKNKSEEIEAYLSLGAT
SRQAAQKVIKTAIKTGMIPTVDSMKTLGIVQLPGMMTGLILGGVDPIEAVKYQIMVTFMLASTVAISCFSVTFLTYRNFF
TKYHQLVSDLQ

Sequences:

>Translated_251_residues
MSVLSLTLASSLVLISIFVSYYQKLGIEKEIVIGTIRAVVQLTIVGYILHYIFAADNALFTLAMVSLMIVVAGNNASKRG
KGIPNVFYFITFSIALSAAITISLLILFGNIHFRPQEVIPVSGMIIGNSMVASGLAVSRLKDEIKNKSEEIEAYLSLGAT
SRQAAQKVIKTAIKTGMIPTVDSMKTLGIVQLPGMMTGLILGGVDPIEAVKYQIMVTFMLASTVAISCFSVTFLTYRNFF
TKYHQLVSDLQ
>Mature_250_residues
SVLSLTLASSLVLISIFVSYYQKLGIEKEIVIGTIRAVVQLTIVGYILHYIFAADNALFTLAMVSLMIVVAGNNASKRGK
GIPNVFYFITFSIALSAAITISLLILFGNIHFRPQEVIPVSGMIIGNSMVASGLAVSRLKDEIKNKSEEIEAYLSLGATS
RQAAQKVIKTAIKTGMIPTVDSMKTLGIVQLPGMMTGLILGGVDPIEAVKYQIMVTFMLASTVAISCFSVTFLTYRNFFT
KYHQLVSDLQ

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=243, Percent_Identity=48.9711934156379, Blast_Score=237, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27232; Mature: 27101

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCC
>Mature Secondary Structure 
SVLSLTLASSLVLISIFVSYYQKLGIEKEIVIGTIRAVVQLTIVGYILHYIFAADNALF
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TLAMVSLMIVVAGNNASKRGKGIPNVFYFITFSIALSAAITISLLILFGNIHFRPQEVIP
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VSGMIIGNSMVASGLAVSRLKDEIKNKSEEIEAYLSLGATSRQAAQKVIKTAIKTGMIPT
CCCEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
VDSMKTLGIVQLPGMMTGLILGGVDPIEAVKYQIMVTFMLASTVAISCFSVTFLTYRNFF
HHHHHHCCCEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKYHQLVSDLQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]