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The map label for this gene is xylH [H]

Identifier: 167038897

GI number: 167038897

Start: 238981

End: 240171

Strand: Direct

Name: xylH [H]

Synonym: Teth514_0228

Alternate gene names: 167038897

Gene position: 238981-240171 (Clockwise)

Preceding gene: 167038896

Following gene: 167038902

Centisome position: 9.73

GC content: 34.51

Gene sequence:

>1191_bases
TTGAAGGAATTTATTCGCCATTTAAAAGAATTTTTGAAAGATCATGTAAGAGATTATGCTATGTTTATAGCACTTTTTGC
AATAATGGCTGTTTTTGCGGCCCTCTCTGGCGGCGATTTTTTATCACCTGTAAATATTAGTAATCTTGTGGACCAGACGG
GATATATAGCTGTTCTTGCAATTGGAGAAACTTTAATTATTGTTATACGACATATTGACCTTTCTGTAGGATTTTTGTCT
GGATTTTTAGGAGCAATTGCAGCTATATTGATGCAATTTTATCACTTTTCTGCTTTATCAGCCATTATAATAGTGCTAGG
ATTAGGAACATTAGCTGGATTACTAAACGGTTCGCTAGTAACCTACTTAAGAATCCCAGCTTTTGTTGCTACTTTAGCAG
GTTGGTTAGCTTATCGTGGCGCTCTTTTGTTGGCTACAAAAGGATCTGGAACTATTATAATTACCAATAAAACTTTTAAT
GCTATAGGCAACGGTTTTATTCCAGACTTGCCTTTTATAAATAATATTTTACCTAATTATCATAAGCTTACATTGTTAGT
GGGTATTGTAGCAGCAGTGCTAATTGTTTATTTTTCTCTTAAGAATAGAGCCCAACAAATTAAAAGAGGATTTGATGTAC
TTCCACTAGACATTTTCCTTATCGAATTGCTTTTTATTGATGCTTTATTGTTATATATAACTTTTATTTTAGCAGCTCAT
CGAGGGATTTCATGGACCCTTGTAATTATGATAATTACCACAGTTATTTATAGTTTTATTACTAATAGAACCGTTTTGGG
AAGACATATTTATGCAGTAGGTGGTAATCCAGAAGCGGCTGCTTTAAGTGGAATTAATGTGAAAAAAATTACCCTTATTG
TCTTTGCTTCGATGGGTTTTCTTTCAGGTTTATCAGGAATATTGTTTGCTTCCAGACTTCAATCAGCTACAACTACTGCT
GGTACTCTTTTTGAACTTTATGCTATTGCTGGAGCTTATATAGGAGGAGTATCTGCAGCAGGCGGAGTGGGAAAAGTAAT
CAACTCATTGATTGGAGCATTTGTTATGTCAACTTTGACTAATGGAATGAATCTTCTAGGAGTGGATATTTCGCTTCAAT
ATATAATTCTTGGAATAGTTTTGGCTGCCGCTGTCATATTTGATGTAGCAACTCGCAGCAAGGAAAGATAA

Upstream 100 bases:

>100_bases
ATATAATGAGCAAAGGTAAAATTACAGGGGAATTGAAATCAGAAGAAGCCAATCAAGAAATCGTAATGGCTTATGCCGTG
AGCTAAAGGAGGGTTTAAGA

Downstream 100 bases:

>100_bases
AAAAGACGGGTATGTCCCGTCTTTTTTATCCCCCGCTTTTTCAATGGTCCCCCTCTATTTGCTCCACTTTAAAACAGGAT
TTCTTGCAGCCAGTACCTCA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKEFIRHLKEFLKDHVRDYAMFIALFAIMAVFAALSGGDFLSPVNISNLVDQTGYIAVLAIGETLIIVIRHIDLSVGFLS
GFLGAIAAILMQFYHFSALSAIIIVLGLGTLAGLLNGSLVTYLRIPAFVATLAGWLAYRGALLLATKGSGTIIITNKTFN
AIGNGFIPDLPFINNILPNYHKLTLLVGIVAAVLIVYFSLKNRAQQIKRGFDVLPLDIFLIELLFIDALLLYITFILAAH
RGISWTLVIMIITTVIYSFITNRTVLGRHIYAVGGNPEAAALSGINVKKITLIVFASMGFLSGLSGILFASRLQSATTTA
GTLFELYAIAGAYIGGVSAAGGVGKVINSLIGAFVMSTLTNGMNLLGVDISLQYIILGIVLAAAVIFDVATRSKER

Sequences:

>Translated_396_residues
MKEFIRHLKEFLKDHVRDYAMFIALFAIMAVFAALSGGDFLSPVNISNLVDQTGYIAVLAIGETLIIVIRHIDLSVGFLS
GFLGAIAAILMQFYHFSALSAIIIVLGLGTLAGLLNGSLVTYLRIPAFVATLAGWLAYRGALLLATKGSGTIIITNKTFN
AIGNGFIPDLPFINNILPNYHKLTLLVGIVAAVLIVYFSLKNRAQQIKRGFDVLPLDIFLIELLFIDALLLYITFILAAH
RGISWTLVIMIITTVIYSFITNRTVLGRHIYAVGGNPEAAALSGINVKKITLIVFASMGFLSGLSGILFASRLQSATTTA
GTLFELYAIAGAYIGGVSAAGGVGKVINSLIGAFVMSTLTNGMNLLGVDISLQYIILGIVLAAAVIFDVATRSKER
>Mature_396_residues
MKEFIRHLKEFLKDHVRDYAMFIALFAIMAVFAALSGGDFLSPVNISNLVDQTGYIAVLAIGETLIIVIRHIDLSVGFLS
GFLGAIAAILMQFYHFSALSAIIIVLGLGTLAGLLNGSLVTYLRIPAFVATLAGWLAYRGALLLATKGSGTIIITNKTFN
AIGNGFIPDLPFINNILPNYHKLTLLVGIVAAVLIVYFSLKNRAQQIKRGFDVLPLDIFLIELLFIDALLLYITFILAAH
RGISWTLVIMIITTVIYSFITNRTVLGRHIYAVGGNPEAAALSGINVKKITLIVFASMGFLSGLSGILFASRLQSATTTA
GTLFELYAIAGAYIGGVSAAGGVGKVINSLIGAFVMSTLTNGMNLLGVDISLQYIILGIVLAAAVIFDVATRSKER

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=382, Percent_Identity=35.3403141361257, Blast_Score=194, Evalue=6e-51,
Organism=Escherichia coli, GI1790191, Length=380, Percent_Identity=33.4210526315789, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790524, Length=157, Percent_Identity=40.7643312101911, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI145693152, Length=142, Percent_Identity=38.0281690140845, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1788896, Length=156, Percent_Identity=34.6153846153846, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI87082395, Length=328, Percent_Identity=26.8292682926829, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788471, Length=135, Percent_Identity=40, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42366; Mature: 42366

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFIRHLKEFLKDHVRDYAMFIALFAIMAVFAALSGGDFLSPVNISNLVDQTGYIAVLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEE
IGETLIIVIRHIDLSVGFLSGFLGAIAAILMQFYHFSALSAIIIVLGLGTLAGLLNGSLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TYLRIPAFVATLAGWLAYRGALLLATKGSGTIIITNKTFNAIGNGFIPDLPFINNILPNY
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHHCCCCCCCCCHHHHHCCCH
HKLTLLVGIVAAVLIVYFSLKNRAQQIKRGFDVLPLDIFLIELLFIDALLLYITFILAAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RGISWTLVIMIITTVIYSFITNRTVLGRHIYAVGGNPEAAALSGINVKKITLIVFASMGF
CCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHH
LSGLSGILFASRLQSATTTAGTLFELYAIAGAYIGGVSAAGGVGKVINSLIGAFVMSTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
NGMNLLGVDISLQYIILGIVLAAAVIFDVATRSKER
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEFIRHLKEFLKDHVRDYAMFIALFAIMAVFAALSGGDFLSPVNISNLVDQTGYIAVLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEE
IGETLIIVIRHIDLSVGFLSGFLGAIAAILMQFYHFSALSAIIIVLGLGTLAGLLNGSLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TYLRIPAFVATLAGWLAYRGALLLATKGSGTIIITNKTFNAIGNGFIPDLPFINNILPNY
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHHCCCCCCCCCHHHHHCCCH
HKLTLLVGIVAAVLIVYFSLKNRAQQIKRGFDVLPLDIFLIELLFIDALLLYITFILAAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RGISWTLVIMIITTVIYSFITNRTVLGRHIYAVGGNPEAAALSGINVKKITLIVFASMGF
CCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHH
LSGLSGILFASRLQSATTTAGTLFELYAIAGAYIGGVSAAGGVGKVINSLIGAFVMSTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
NGMNLLGVDISLQYIILGIVLAAAVIFDVATRSKER
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]