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The map label for this gene is csiE [H]

Identifier: 162418375

GI number: 162418375

Start: 463127

End: 464473

Strand: Direct

Name: csiE [H]

Synonym: YpAngola_A0443

Alternate gene names: 162418375

Gene position: 463127-464473 (Clockwise)

Preceding gene: 162419350

Following gene: 162421929

Centisome position: 10.28

GC content: 46.92

Gene sequence:

>1347_bases
ATGCGCCTAAACACGCCCTTTAAGCCTCGGTTATCTGATGATCAACCGCTATCTGGTCAACAACGCCGCTGCCATATGTT
GCTGATGTTATTTATGCCAGCACGCAAGGTACAGTTAGACACCATTAGCCAATTTAACGGGGTCGATCTTGCGACTACCC
GGCAAGATATAGCCGAGGTTGCTAGCGAAATCCAGTGTTTCTACCATTTGGAACTTAATGCCAGTGCCGACGATTATTAT
CAGATTAATGGGAGCCGACTCGATAAACGACTCTGTTTGATCCATTGGCTACGTCGTGGGCTGCGTTATTGTCCACATTT
TATTGAACACTATTTTTCCCCCGACTTATATCAAGCACTGGCGTGGAATAATGGCCTGCTGTCGTCGGCTCTGCGACGAT
CAACTCTACGACAATCAACTTTGCGGCAATCAATTCTACGGCAATCAACTTTGCGACAAATCGTTTACCAGTGTGAGCCC
CACCTAAACCGCCAACTCAGTGAAAAAGATCGTCAGTTTTTGCAACTGTATTTGGCGTATTGTGTCTGGGAAAACCAACA
GCACACCGTGCCACAATTATCCATGACCCAACAGCAATGGTTAGAACAAAAACCTGCGCGGGTTGCCGCTGATCATTTAT
TCAATGCACTCAACCGGTTATTGATCCCTCCGCTGGGTTTAATTGAGCGCGATATGCTGATCCTGATGTTGACAATGATC
AAAGCACACCACTACCACAGCACCCAATCACCGGAAGATGCCCGCCTGATAGCGGCTATCAAGCAATTAATTCACCGTTT
TAAGCGACTGTCCGGCATGCATTTTAGTTGTGATGACTCGCTGGTCAGCCAGCTATTCGCGCATCTCGCCCCCGCCATTG
AGCGTTGCTATTTTAATATTGGGATCGACCATTCACTCCCCAAAGATATCAGTAAGATGTATCCCCGTTTGCTCCGTACC
ACACAGCAGGCGCTGATCAAGTTTGAGCAGGAGTACCAGATTCGCTTTTCTATTGAAGAAGTGATTTTGATCGCCATCAG
CTTCGGTGCCTGGTTAATACAGGGGAATGCATTACAGGAGAAGCAGATTTTATTATTGACGCACGATAACCCAATATTGG
AAGCCCAAGTCGAGCAGCAAATTCGTGAACTGACCTTACTACCGCTACATATTAAATATTTATCTCATGATGTTTATCTG
CAATCAGGGGCCCCCGCGGGCACTGCGGTGGTACTTACCCCCTATGTTTTGCAATCAACTGAATCAGCGCCGCCGCTGAT
TCAGATATCATTTCCGTTAACTGAGCCGCAAAGTATTCAGTTATGCCGCATATTGGAACTGCCTTAG

Upstream 100 bases:

>100_bases
TGTAAGTCGATGTAAAAAACTACTGGCCCGGTAAACCGAATGAATCTCTTTTGCTATGCTTAAATCCGATAAATAACGAT
GATTCATCAAAGATATTTAT

Downstream 100 bases:

>100_bases
CTGGCTAATTCATTTGGGTTCGCGGCCACTCGTGGCCGGATAAACAGCGCCGGAATAACAATGAGCGCCATAACCCAAAA
GACCCCACTCTGATAATTCT

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQCFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSILRQSTLRQIVYQCEP
HLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMI
KAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYPRLLRT
TQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYL
QSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Sequences:

>Translated_448_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQCFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSILRQSTLRQIVYQCEP
HLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMI
KAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYPRLLRT
TQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYL
QSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP
>Mature_448_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQCFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSILRQSTLRQIVYQCEP
HLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMI
KAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYPRLLRT
TQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYL
QSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=438, Percent_Identity=37.6712328767123, Blast_Score=284, Evalue=9e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 51949; Mature: 51949

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQCFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAY
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMI
HHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEECCCCCC
KQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQST
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECHHHHHCC
ESAPPLIQISFPLTEPQSIQLCRILELP
CCCCCEEEEECCCCCCCCCCHHEEECCC
>Mature Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQCFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAY
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMI
HHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEECCCCCC
KQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQST
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECHHHHHCC
ESAPPLIQISFPLTEPQSIQLCRILELP
CCCCCEEEEECCCCCCCCCCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]