Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149545
Identifier: 162149545
GI number: 162149545
Start: 3866969
End: 3867739
Strand: Direct
Name: 162149545
Synonym: GDI_3783
Alternate gene names: NA
Gene position: 3866969-3867739 (Clockwise)
Preceding gene: 162149544
Following gene: 162149548
Centisome position: 98.04
GC content: 60.7
Gene sequence:
>771_bases ATGACGGACGGGGAGTGGGCTTTGATCATGCCATTTGTACCCCCGGCGAAACGGGGCGGTCGCCCCCGCACTACGGATAT GCGCGAGGTGGTCAACGCGATGCTCTACATAGCCTCGGCCGGGTGTGCGTGGCGCCTGCTGCCGAAATGCTTTCCGCCGG TCTCGACCGTCAGGCGCTATTTTTACGCCTGGCGTGGTGCCGGAGTGTTCGAAGTCATGAATACGGTGCTGGTCATGAGC CTGCGCGAGATCGAGGGGCGTGAAGCCTCTCCGAGCGCGGGCGTGATTGACAGCCAGTCGGTGAAAACCACGGAAAGTGG CGGGCTTTCGGGCTATGACGCGGGGAAGAAGGTCAAGGGCCGCAAGCGCCATATTGTGACGGATACTGCGGGCTTCCTGA TCTTTCTCCTCGTTCATGCCGCCGACATCCAGGACCGTGATGGGGCTGTTGATGTCCTGGCAGCGATACGCAGGCGCTTT CCCTGGCTGCGCCACATCTTCGCTGATGGCGGCTATGCTGGCGACAAATTGCGATCCGCGCTCGCCTCCATGGGAAAATG GACCCTTGAAATCATCAGGCGGTCCGATACGGCGAAGGGCTTTCAGATCCTGCCGCGCCGCTGGGTGGTTGAACGGACAT TCGCATGGCTGGGACGGTGCAGGCGGCTCGCCAAAGACTGGGAACAATCCATTGCTTCCTCAACCGCATGGACATTGATC GCCTCGATCCGAATGCTCACACGACGGACAGCAAGGCATTGTCACGGTTGA
Upstream 100 bases:
>100_bases GTGATTCATCCGTCTTTGCGAAGAGATGGAGTGAATGGTGACATGGACTGGTATTGCCCGACGTGAACATAGCCGGGAAG GGTTGCGATATCCATCGGAT
Downstream 100 bases:
>100_bases AGAACTTTCGGATCGGGCTCTGAGGCGTGGCCGAGCCCTCAAATTCGCACACCTGGCGCCACGCCATTGCGATGGTGAAT ATAAATGGGAATGGAACTGG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; Insertion Sequence Transposase Protein; IS3/IS4 Family Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein; Transposase Is4-Like Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRYFYAWRGAGVFEVMNTVLVMS LREIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKGRKRHIVTDTAGFLIFLLVHAADIQDRDGAVDVLAAIRRRF PWLRHIFADGGYAGDKLRSALASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLI ASIRMLTRRTARHCHG
Sequences:
>Translated_256_residues MTDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRYFYAWRGAGVFEVMNTVLVMS LREIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKGRKRHIVTDTAGFLIFLLVHAADIQDRDGAVDVLAAIRRRF PWLRHIFADGGYAGDKLRSALASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLI ASIRMLTRRTARHCHG >Mature_255_residues TDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRYFYAWRGAGVFEVMNTVLVMSL REIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKGRKRHIVTDTAGFLIFLLVHAADIQDRDGAVDVLAAIRRRFP WLRHIFADGGYAGDKLRSALASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLIA SIRMLTRRTARHCHG
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28726; Mature: 28595
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRY CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH FYAWRGAGVFEVMNTVLVMSLREIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKG HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RKRHIVTDTAGFLIFLLVHAADIQDRDGAVDVLAAIRRRFPWLRHIFADGGYAGDKLRSA CCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHH LASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASIRMLTRRTARHCHG HHHHHHHHHHHHHCCC >Mature Secondary Structure TDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRY CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH FYAWRGAGVFEVMNTVLVMSLREIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKG HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RKRHIVTDTAGFLIFLLVHAADIQDRDGAVDVLAAIRRRFPWLRHIFADGGYAGDKLRSA CCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHH LASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASIRMLTRRTARHCHG HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA