Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149544
Identifier: 162149544
GI number: 162149544
Start: 3866051
End: 3866599
Strand: Direct
Name: 162149544
Synonym: GDI_3782
Alternate gene names: NA
Gene position: 3866051-3866599 (Clockwise)
Preceding gene: 162149543
Following gene: 162149545
Centisome position: 98.02
GC content: 63.57
Gene sequence:
>549_bases ATGCGCCGCTCCGACGCGCATGAATACCGGCAAGCCTACAATGCCCAGGCCGTGGTTTGTGCCGAGGGCAGCCAGTTGAT CTTGGAAAATGGCGTCGTTGCGACGACGGCGGACGCGCCCAGCTTCGCCGCCACCATCCTGGGTATGGAGGAGAGGATCG GCCTGCCACGAACCGTCCTCGCCGACACGGGTTTCGCCAGCGGCAAAGCCGTCGAAACGTTGCAGGCCAGCGGCGTGGAC CCGCTGGTCGCCATCGGACGCCCTGTGAATCGGCGCCCTTATGACTTCCGGCCAGAACCGCCACCCAGGGAGCCGCGCCG GATCACCGAGCCCTGGCGCCTGGAAATGAAGGCCAGGCTGCAACAGAACCCGGCAAAAGCCCTTTACGCCTTACGCAAGC AGACCGTCGAACCGGTCTTCGGTATCATCAAGAGCGCCATGGGCTTCACCCGTTTCCATCTCCGTGGCCTCCCCAACGTC GCAACAGAATGGACGCTCGTCGCCCTCGCATATAATTGCCGTAGGATCACGCGACTGACGGCCGCATAA
Upstream 100 bases:
>100_bases TGATGCGAAGCGGGGACGGCGCGGTCGGCCGCCGAAAGAACCGGACGATGAACCGCCACCAGACCGGCAGATCAACCTGA CCGATCCGGACAGCAAGCTG
Downstream 100 bases:
>100_bases ACGCCGTCGTCGCCGTCACTCATCACTACGGCAGCGCCCAATCCGACAGCCTGCTAGACAATCTTAGACGACCGGCATTG GGACGCACAGCGACTGTCAC
Product: transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVD PLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNV ATEWTLVALAYNCRRITRLTAA
Sequences:
>Translated_182_residues MRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVD PLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNV ATEWTLVALAYNCRRITRLTAA >Mature_182_residues MRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVD PLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNV ATEWTLVALAYNCRRITRLTAA
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20172; Mature: 20172
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVL CCCCHHHHHHHHCCCCEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHH ADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARL HCCCCCCCCHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH QQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AA CC >Mature Secondary Structure MRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVL CCCCHHHHHHHHCCCCEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHH ADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARL HCCCCCCCCHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH QQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA