Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is crcB [H]
Identifier: 162149534
GI number: 162149534
Start: 3857922
End: 3858344
Strand: Direct
Name: crcB [H]
Synonym: GDI_3772
Alternate gene names: 162149534
Gene position: 3857922-3858344 (Clockwise)
Preceding gene: 162149533
Following gene: 162149536
Centisome position: 97.81
GC content: 65.25
Gene sequence:
>423_bases GTGACGAATTTTCTTCCGACGCTCTGGATTGCTCTCGCGGGTGCCGCAGGCACGCTCCTGCGCTACTGGATCGGGCTGGC GACGCTGCGCTGGAGCCAGTCGCTGCCCTGGGGCACGATCCTGATCAATGCGACCGGCTCGTTCGCCATCGCGTTCTTCG GCAGCCTGACCGTCGCGGGCGCGCGCTTCCCGCTGTCCGATACGCAAAGGGTGGTCTTCATGGTCGGGCTGTGCGGCGGA TATACGACCTTTTCCTCGTTCAGCCTCCAGACGCTCGATCTGCTGCGGAATGGCGCGCCGGTCAGGGCTTTTCTCAATAT CGGGTTGTCGGTCGTCCTGTGCATGGCGACCGTCTCGGCCGGCTACCTCGCCGCCCAGGCCGTCAATCACGCGCACGCGC GCCGGCTTCATCAGGCATCGTGA
Upstream 100 bases:
>100_bases CTTCGGGTCGCTCTCGCTCAGCAGCGGGACTTTTGAAGCAGCCTCCGAGAGCCTGACCGGACAGGCTCCGAGGCTCCACC CCGACAGGGATTGAACCGAC
Downstream 100 bases:
>100_bases AAAAGCCGCCTGACGGGCAGGGCGTGCACCGCCCGGATACCGGGCGGCCCTGGGGGCCGCCCGCCATGTCCGGGCAGGGT CAGACGCGCAGTGCCGCGAC
Product: chromosome condensation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTNFLPTLWIALAGAAGTLLRYWIGLATLRWSQSLPWGTILINATGSFAIAFFGSLTVAGARFPLSDTQRVVFMVGLCGG YTTFSSFSLQTLDLLRNGAPVRAFLNIGLSVVLCMATVSAGYLAAQAVNHAHARRLHQAS
Sequences:
>Translated_140_residues MTNFLPTLWIALAGAAGTLLRYWIGLATLRWSQSLPWGTILINATGSFAIAFFGSLTVAGARFPLSDTQRVVFMVGLCGG YTTFSSFSLQTLDLLRNGAPVRAFLNIGLSVVLCMATVSAGYLAAQAVNHAHARRLHQAS >Mature_139_residues TNFLPTLWIALAGAAGTLLRYWIGLATLRWSQSLPWGTILINATGSFAIAFFGSLTVAGARFPLSDTQRVVFMVGLCGGY TTFSSFSLQTLDLLRNGAPVRAFLNIGLSVVLCMATVSAGYLAAQAVNHAHARRLHQAS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14950; Mature: 14818
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFLPTLWIALAGAAGTLLRYWIGLATLRWSQSLPWGTILINATGSFAIAFFGSLTVAG CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHCC ARFPLSDTQRVVFMVGLCGGYTTFSSFSLQTLDLLRNGAPVRAFLNIGLSVVLCMATVSA CCCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GYLAAQAVNHAHARRLHQAS HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNFLPTLWIALAGAAGTLLRYWIGLATLRWSQSLPWGTILINATGSFAIAFFGSLTVAG CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHCC ARFPLSDTQRVVFMVGLCGGYTTFSSFSLQTLDLLRNGAPVRAFLNIGLSVVLCMATVSA CCCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GYLAAQAVNHAHARRLHQAS HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA