Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162149533
Identifier: 162149533
GI number: 162149533
Start: 3856880
End: 3857704
Strand: Direct
Name: 162149533
Synonym: GDI_3771
Alternate gene names: NA
Gene position: 3856880-3857704 (Clockwise)
Preceding gene: 162149532
Following gene: 162149534
Centisome position: 97.79
GC content: 68.73
Gene sequence:
>825_bases GTGAGCATGCGCATTCTCGTCGTTCTCGACCGGCCTGACACCGTGACCTTCACGCTCGAGGTGGCCGGGCAACTGGCGGA CCGGTTCGCGTGCCGGGACATTCGTCTGCTGCATCCCCAACTGGAAGACGATCCCGATTTCAGGGCACCGGACGAGGGCA TGCCGACGCGGGAAGACCGCCTGCGTTTCGCGCGGTCCGTGTCCGACCGTGCGGACCGGCTTCGCGCCGCCTGCGCGGAC TGGATCACGGCGTCGGGCCGAACCGCGACCGCCCGCTGGATCGAGATAGCGGGGGATGTCCAGAAGATCGTGGCGCGCGA AGCCGCGAACGCCGACCTGACGGTTCTGAGCCGCCCGCGCCCGAAGGACCCCGCATTCGTCGGACAGGCCTTCACCGGCG CGTTGTACGATGCGCAGTCCACGGTCGTGATCGCGCCCCTTCATCATCACCCGACCGTCGGCGCGCGGCCCGTCATTGCC TGGCGTCCGTCCCACGCGCTCGAACGCGCGATCGCATCGGCCACCCCCTTGCTGTCCAGGGCGGAGGTGGTCACGTGGGT CATCGGTGAGGGCGGACACGGGACGGTCGAACTGCCCCCGGTGGCGGCCCAACTGGAATCCAGGGGGGTCAGGACCGTCG TCGATCGGTTCACGCTCGACGATGGCGATCCCGGCGAGCAGATCCGCGCCCATGCCCTTGCGGCGCAGGCCGACCTCCTG ATCATGGGGTCCTACACCCATCCGCGCTTCGTCGAATGGCTCTTCGGCGGGCCGACGCGCGATATCCTCGCCCATGGTAC CCTCCCGATCCTGACCCACCATTGA
Upstream 100 bases:
>100_bases CGTTTCCTGTTCGCGGGCAGGCGATTATGCTTGCCCGTGACCCGTTCCCTTGGACCCTGTTTTTACCGCTGTTTTCAACT ATGTTGTCCTGGCAGGAGGC
Downstream 100 bases:
>100_bases GAGGCTGCTTCAGAAGCTCCGCTGCCGGCGATCCGACGCGCGTTTCCTGTGCTCCGATGCTCATGGCCCATAAGGCCACT CCGCTTCGGTGCTCGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Protein Family Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress UspA Protein; Universal Stress Family Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSMRILVVLDRPDTVTFTLEVAGQLADRFACRDIRLLHPQLEDDPDFRAPDEGMPTREDRLRFARSVSDRADRLRAACAD WITASGRTATARWIEIAGDVQKIVAREAANADLTVLSRPRPKDPAFVGQAFTGALYDAQSTVVIAPLHHHPTVGARPVIA WRPSHALERAIASATPLLSRAEVVTWVIGEGGHGTVELPPVAAQLESRGVRTVVDRFTLDDGDPGEQIRAHALAAQADLL IMGSYTHPRFVEWLFGGPTRDILAHGTLPILTHH
Sequences:
>Translated_274_residues MSMRILVVLDRPDTVTFTLEVAGQLADRFACRDIRLLHPQLEDDPDFRAPDEGMPTREDRLRFARSVSDRADRLRAACAD WITASGRTATARWIEIAGDVQKIVAREAANADLTVLSRPRPKDPAFVGQAFTGALYDAQSTVVIAPLHHHPTVGARPVIA WRPSHALERAIASATPLLSRAEVVTWVIGEGGHGTVELPPVAAQLESRGVRTVVDRFTLDDGDPGEQIRAHALAAQADLL IMGSYTHPRFVEWLFGGPTRDILAHGTLPILTHH >Mature_273_residues SMRILVVLDRPDTVTFTLEVAGQLADRFACRDIRLLHPQLEDDPDFRAPDEGMPTREDRLRFARSVSDRADRLRAACADW ITASGRTATARWIEIAGDVQKIVAREAANADLTVLSRPRPKDPAFVGQAFTGALYDAQSTVVIAPLHHHPTVGARPVIAW RPSHALERAIASATPLLSRAEVVTWVIGEGGHGTVELPPVAAQLESRGVRTVVDRFTLDDGDPGEQIRAHALAAQADLLI MGSYTHPRFVEWLFGGPTRDILAHGTLPILTHH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30008; Mature: 29877
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRILVVLDRPDTVTFTLEVAGQLADRFACRDIRLLHPQLEDDPDFRAPDEGMPTREDR CCEEEEEEEECCCEEEEEEEEHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCCCCHHHH LRFARSVSDRADRLRAACADWITASGRTATARWIEIAGDVQKIVAREAANADLTVLSRPR HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCC PKDPAFVGQAFTGALYDAQSTVVIAPLHHHPTVGARPVIAWRPSHALERAIASATPLLSR CCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHC AEVVTWVIGEGGHGTVELPPVAAQLESRGVRTVVDRFTLDDGDPGEQIRAHALAAQADLL CEEEEEEEECCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEE IMGSYTHPRFVEWLFGGPTRDILAHGTLPILTHH EEECCCCHHHHHHHCCCCHHHHHHCCCEEEEECC >Mature Secondary Structure SMRILVVLDRPDTVTFTLEVAGQLADRFACRDIRLLHPQLEDDPDFRAPDEGMPTREDR CEEEEEEEECCCEEEEEEEEHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCCCCHHHH LRFARSVSDRADRLRAACADWITASGRTATARWIEIAGDVQKIVAREAANADLTVLSRPR HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCC PKDPAFVGQAFTGALYDAQSTVVIAPLHHHPTVGARPVIAWRPSHALERAIASATPLLSR CCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHC AEVVTWVIGEGGHGTVELPPVAAQLESRGVRTVVDRFTLDDGDPGEQIRAHALAAQADLL CEEEEEEEECCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEE IMGSYTHPRFVEWLFGGPTRDILAHGTLPILTHH EEECCCCHHHHHHHCCCCHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA