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The map label for this gene is ydhJ [H]

Identifier: 162149523

GI number: 162149523

Start: 3845578

End: 3846489

Strand: Direct

Name: ydhJ [H]

Synonym: GDI_3761

Alternate gene names: 162149523

Gene position: 3845578-3846489 (Clockwise)

Preceding gene: 162149522

Following gene: 162149524

Centisome position: 97.5

GC content: 67.65

Gene sequence:

>912_bases
ATGCCCCTTCTGCGCACCCTGATCCGCGTGGTCCTGACCCTGAGCGTTGTTGCGCTGGCGATCGTCATGGGCGTGACCCT
GTGGGACACGTATATGATTGCCCCCTGGACGCGCGACGGTCGCGTGCGGGTGTATGTGGTGGACGTGGCGCCGGAAGTGC
CGGGCACGGTGGTGCAGGTTCCGGTGGTGGACAACCAGTTCGTGCACAGGGGGGACCCGCTGTTCGTGCTGGACCCGGTG
CGCTTCCGGCTGGCGATCCGCGAGGCGCAGGCCCGGCTGGACGGGGCGCTGGAGGACCTGAAGCTGAAGCAGAACGACGC
GAAGCGCCGCATGGGGCTGGGCGGCATCGTCTCGGCGGAAGAGCAGGAGGTGTTCAACTCGAACGTGGCGACGCAGATCG
CGGCGGTGGATGCGGCGCGGGCGGCGCTGGACCTGGCGAAGCTGAACCTGCAGCGCTCGGTGCTGTATTCGCCGGTCAAC
GGCTACATCACCAACCTGAACCTGCGGGTGGGCGACTACCTGACGGCGGGGCAGCCGCGCCTGGCGGTGATCGACGCCGA
TTCCTACTGGGTGAACGGGTATTTCGAGGAAACCAAGATGTGGGGCGTGCATGTCGGTGACGTCGCCCGCGTCAAGCTGA
TGGGCTACAAGCAGATCATCCCCGGCCATGTCGTGTCCATCGCGCGCGGCATCAACGACCAGAACGGCACCCCCGACCGG
CTGGGCCTGCAGGACGTCAACCCGATCTTCACCTGGGTGCGGCTGGCGCAGCGCATTCCCGTGCGCGTCCATCTGGACCA
TGTGCCCGACAGCATCACCCTGGCGGCCGGCATGACCTGCACCGTCACCGTCGGCCCGCAGTCGCGCGGCCAGCGGGGGC
GCCTGACCACCTGGCTGCAAGACCACCTGTAA

Upstream 100 bases:

>100_bases
GCGACATCTCGCGCTGTGCGCGGGGGCGAGGTATGCCTGCGTGCGATGGTTTTCGGTAAGGTCCGTCCGACAAACGAAAA
AGAAAAGTTTCGAGAGCGAT

Downstream 100 bases:

>100_bases
GGGATGTGTGCCCGCAGACGCACGCTGGCGGCGATCCGACGCGCATCCGCTGTGCTCCGGTGCTCACGGCCATCAAGGCC
GCTCCGCTCCGGTGCGCGCG

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MPLLRTLIRVVLTLSVVALAIVMGVTLWDTYMIAPWTRDGRVRVYVVDVAPEVPGTVVQVPVVDNQFVHRGDPLFVLDPV
RFRLAIREAQARLDGALEDLKLKQNDAKRRMGLGGIVSAEEQEVFNSNVATQIAAVDAARAALDLAKLNLQRSVLYSPVN
GYITNLNLRVGDYLTAGQPRLAVIDADSYWVNGYFEETKMWGVHVGDVARVKLMGYKQIIPGHVVSIARGINDQNGTPDR
LGLQDVNPIFTWVRLAQRIPVRVHLDHVPDSITLAAGMTCTVTVGPQSRGQRGRLTTWLQDHL

Sequences:

>Translated_303_residues
MPLLRTLIRVVLTLSVVALAIVMGVTLWDTYMIAPWTRDGRVRVYVVDVAPEVPGTVVQVPVVDNQFVHRGDPLFVLDPV
RFRLAIREAQARLDGALEDLKLKQNDAKRRMGLGGIVSAEEQEVFNSNVATQIAAVDAARAALDLAKLNLQRSVLYSPVN
GYITNLNLRVGDYLTAGQPRLAVIDADSYWVNGYFEETKMWGVHVGDVARVKLMGYKQIIPGHVVSIARGINDQNGTPDR
LGLQDVNPIFTWVRLAQRIPVRVHLDHVPDSITLAAGMTCTVTVGPQSRGQRGRLTTWLQDHL
>Mature_302_residues
PLLRTLIRVVLTLSVVALAIVMGVTLWDTYMIAPWTRDGRVRVYVVDVAPEVPGTVVQVPVVDNQFVHRGDPLFVLDPVR
FRLAIREAQARLDGALEDLKLKQNDAKRRMGLGGIVSAEEQEVFNSNVATQIAAVDAARAALDLAKLNLQRSVLYSPVNG
YITNLNLRVGDYLTAGQPRLAVIDADSYWVNGYFEETKMWGVHVGDVARVKLMGYKQIIPGHVVSIARGINDQNGTPDRL
GLQDVNPIFTWVRLAQRIPVRVHLDHVPDSITLAAGMTCTVTVGPQSRGQRGRLTTWLQDHL

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=279, Percent_Identity=42.6523297491039, Blast_Score=231, Evalue=3e-62,
Organism=Escherichia coli, GI1789637, Length=291, Percent_Identity=38.1443298969072, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790519, Length=309, Percent_Identity=28.1553398058252, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788711, Length=294, Percent_Identity=26.8707482993197, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789041, Length=304, Percent_Identity=25, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 33527; Mature: 33396

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRTLIRVVLTLSVVALAIVMGVTLWDTYMIAPWTRDGRVRVYVVDVAPEVPGTVVQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEEEECCCCCCCEEEE
PVVDNQFVHRGDPLFVLDPVRFRLAIREAQARLDGALEDLKLKQNDAKRRMGLGGIVSAE
EECCCCCEECCCCEEEECCHHHHHHHHHHHHHHHCCHHHHEECCCHHHHHCCCCCCCCCH
EQEVFNSNVATQIAAVDAARAALDLAKLNLQRSVLYSPVNGYITNLNLRVGDYLTAGQPR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCEEECCCCE
LAVIDADSYWVNGYFEETKMWGVHVGDVARVKLMGYKQIIPGHVVSIARGINDQNGTPDR
EEEEECCCEEECCEEECCEEEEEEECCEEEEEEECHHHHCCHHHHHHHHCCCCCCCCCCC
LGLQDVNPIFTWVRLAQRIPVRVHLDHVPDSITLAAGMTCTVTVGPQSRGQRGRLTTWLQ
CCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCEEHHHH
DHL
HCC
>Mature Secondary Structure 
PLLRTLIRVVLTLSVVALAIVMGVTLWDTYMIAPWTRDGRVRVYVVDVAPEVPGTVVQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEEEECCCCCCCEEEE
PVVDNQFVHRGDPLFVLDPVRFRLAIREAQARLDGALEDLKLKQNDAKRRMGLGGIVSAE
EECCCCCEECCCCEEEECCHHHHHHHHHHHHHHHCCHHHHEECCCHHHHHCCCCCCCCCH
EQEVFNSNVATQIAAVDAARAALDLAKLNLQRSVLYSPVNGYITNLNLRVGDYLTAGQPR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCEEECCCCE
LAVIDADSYWVNGYFEETKMWGVHVGDVARVKLMGYKQIIPGHVVSIARGINDQNGTPDR
EEEEECCCEEECCEEECCEEEEEEECCEEEEEEECHHHHCCHHHHHHHHCCCCCCCCCCC
LGLQDVNPIFTWVRLAQRIPVRVHLDHVPDSITLAAGMTCTVTVGPQSRGQRGRLTTWLQ
CCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCEEHHHH
DHL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]