Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is yhcP [C]
Identifier: 162149522
GI number: 162149522
Start: 3843135
End: 3845360
Strand: Direct
Name: yhcP [C]
Synonym: GDI_3760
Alternate gene names: 162149522
Gene position: 3843135-3845360 (Clockwise)
Preceding gene: 162149521
Following gene: 162149523
Centisome position: 97.44
GC content: 72.96
Gene sequence:
>2226_bases GTGACCGGACCGGTCCGGTCGGCCCCGGTGTGGCCGCGCCTTGTGCCGGCGGTGTTCACCGACTCCGTGCGCTGGCGGGA CATGGGGGGCCGCGCGGCGTTCTGCGCGCGCGTGTTCGCGTCGATCGGCCTGGCGCTGTATTGCGCGTTCACGTTCCAGC TCGAATCCCCCATGAGTTCGGTGACCACGGTGATGATCGTGGCCAACCCCACGGTCGGCGCGCTGATGTCCAAGAGCGTC TGGCGCATCATCGGCACCGTGCTGGGGGCGGCCGTCAGCGTGGCGCTGATGGCCGGGCTGGCGCAGTCGCCGGTGCTGTA TGTCATGGTGCTGGCGGTGGCGGTGGCCTTCGCCTGCCTGGTCGCGACCTTCCTGCGGCTGTTCCGCGCCTATGCCGCCG TGCTCAGCGGCTATACGATCGTCATCGTCGCGGCACCGTCCTATGCCGATCCCAACGGGATCTTCCTCAGCGCCATGTCG CGGCTGTCGGCGGTCACGGTGGGCATCGTGGCCACCGCGATCGTGTTCATGGCGACCTCGCCCCGCCGGCCGCAGCAGGT GCTGACCCAGATCGGGCAGGTGATGCGCGATGTCGTGGCCCACGCGCTGGCCTTTCACGAATTCCACCAGGGCGCGCCCG TGCGGGACCAGGCGGTGGCCGAGCCCGGGCTGTCCGGTTTCCGTGCCATGCCGGTGCCGCTGTACGACAGTCGCGGCGCG CTGCTGGCGCGGATCGGCGGGCTGGGCGCGGCGGTGGAATATGCCGCGACCGACACGTATGAAATCGCCCGCCGGGTCAA TGCGCTGCGGGTGGGGCTGAGCGGCCTGGCCGGCATCGTCGCCACCTATCATCCGCTGTGGCGCGGCATGGATGGCGACG CGCCCGACCTGCGCCGGCTGCACGGGCGTATCGCCGCGCTGATGACGGAATTGCTGGACCTGATGGCGCGGCCGGGATGG GTGGACGATCCGGCCCCGGTCCGCGCGCGGATCGGCGCGGCGCTGGACCGGCTGGCGGCGGACGAGCGCGCGGCGGCCGC CACGGACGGCACGGCGCTGCTGGCGGCCATGGACACGGTGCGCGACATCCTGGCGCAACTGGATACGGTGATGGGCATCC TGACGGGCGACGCGGTGCCGCGCCGGGTCCGGCTGCGCTGGTTCCTGGACTGGCCCAGCGCGCTGCGCAACGGCGCGCGC GGCGGGATCATCACGCTCCTGGCCGGGCTGATCTGGTATGTGCTGCACTGGCATTCCGGGCCGATGCTGATGCTGTACAT CGTCGCCGCGTCCAGCCTGATCTCGACCACGCCGTCGGCGTCGCGCGCCAGCGTGCTGATGGCGGCGGGCACCGCGCTGT CGGTGCCGGCGGGGGTGGCGTGCCACATGCTGGCGCTGCCGCGCATCGACGGTTTTCCGCTGCTGTGGCTCGTGCTGTGC GCCTTCGTGCTGCCGGGCGCGTGGATCCAGTTCAGCCCGCGCTGGGGCATCGGGGCGTTCGGCTATTCGGTGTTCTTTGC CGCGCAGCTCGATGTCTCCAACCCCATTCGCTATGACGACATCGCGCTGACCAATACCTGGATGGCGTTCCTGATGGCCA GCGCGCTGCTGGTGCTGGGCTTTCGCGTCATCCTGCCGCCCGACGACCGGCTGGACGCGGCGCGGCTGGCCGCGTCGATC ACCCGTTCGCTGCGCCGGCTGGCGCTGGTGCTGCCCGACGGGCCCGGGACGTGGGTGGCGTGGGAAGGGCTGCAGGTCCA GAAGACCACCCGCATGGTCCAGCGGCTGGCGCTGTGCATGCCGCCGGCCGAACGGCAGGCCCGTATCGACGCCGCGCTGG CGTCGGTGTCGCTGGGGCGGCTGGTGATCCGGGCGCGGCGCATCGCCGACGGGCCGGCGCTGGCGGCGCGGGACCGCGCG GCCCTGCATGCGGCGCTGGGTGGCTTCGCGCGCCTGCGCCGCGACCCGGACGGCACCGCGCGCGGGCTGGAGGGCGCGGC GGACGCGATGCGGGCCGGCGCCGACACCGGCACCGACGCGGGGCTGGCGGCGTGGCGCGTGGCGGCGTGCCTGGACCAGG CGGCCCATATCCTGCGCGCCGTTCCGGGCTTCTTCCACCGGCACGGGCCGCTGCAGCTTGCCCCCGACATGCCGGGCGCA CGGCGCACGCTGGCGGCGCCCGTGCCGGCCTATAGCGTGATCCTGGGGCGGGTCGTCCATGGCTGA
Upstream 100 bases:
>100_bases CGGCGGGCCTGCCGCGTGAGGCCATTCCGGGGCTGGTGGGCCTGCTGGACCGCATCCTGCTGAATGCCGAGCGCGCGTCG GCCGCCGGCCGGGACGTGCC
Downstream 100 bases:
>100_bases TCGCGACGGGCCGCATCGGAGCGCAGGAAACGCGCGAAGGACGCGCCGGCAGCGGGACTTTTGAAGCAGCCTCGCGGTCC GCGCGGTGCTGGCATGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MTGPVRSAPVWPRLVPAVFTDSVRWRDMGGRAAFCARVFASIGLALYCAFTFQLESPMSSVTTVMIVANPTVGALMSKSV WRIIGTVLGAAVSVALMAGLAQSPVLYVMVLAVAVAFACLVATFLRLFRAYAAVLSGYTIVIVAAPSYADPNGIFLSAMS RLSAVTVGIVATAIVFMATSPRRPQQVLTQIGQVMRDVVAHALAFHEFHQGAPVRDQAVAEPGLSGFRAMPVPLYDSRGA LLARIGGLGAAVEYAATDTYEIARRVNALRVGLSGLAGIVATYHPLWRGMDGDAPDLRRLHGRIAALMTELLDLMARPGW VDDPAPVRARIGAALDRLAADERAAAATDGTALLAAMDTVRDILAQLDTVMGILTGDAVPRRVRLRWFLDWPSALRNGAR GGIITLLAGLIWYVLHWHSGPMLMLYIVAASSLISTTPSASRASVLMAAGTALSVPAGVACHMLALPRIDGFPLLWLVLC AFVLPGAWIQFSPRWGIGAFGYSVFFAAQLDVSNPIRYDDIALTNTWMAFLMASALLVLGFRVILPPDDRLDAARLAASI TRSLRRLALVLPDGPGTWVAWEGLQVQKTTRMVQRLALCMPPAERQARIDAALASVSLGRLVIRARRIADGPALAARDRA ALHAALGGFARLRRDPDGTARGLEGAADAMRAGADTGTDAGLAAWRVAACLDQAAHILRAVPGFFHRHGPLQLAPDMPGA RRTLAAPVPAYSVILGRVVHG
Sequences:
>Translated_741_residues MTGPVRSAPVWPRLVPAVFTDSVRWRDMGGRAAFCARVFASIGLALYCAFTFQLESPMSSVTTVMIVANPTVGALMSKSV WRIIGTVLGAAVSVALMAGLAQSPVLYVMVLAVAVAFACLVATFLRLFRAYAAVLSGYTIVIVAAPSYADPNGIFLSAMS RLSAVTVGIVATAIVFMATSPRRPQQVLTQIGQVMRDVVAHALAFHEFHQGAPVRDQAVAEPGLSGFRAMPVPLYDSRGA LLARIGGLGAAVEYAATDTYEIARRVNALRVGLSGLAGIVATYHPLWRGMDGDAPDLRRLHGRIAALMTELLDLMARPGW VDDPAPVRARIGAALDRLAADERAAAATDGTALLAAMDTVRDILAQLDTVMGILTGDAVPRRVRLRWFLDWPSALRNGAR GGIITLLAGLIWYVLHWHSGPMLMLYIVAASSLISTTPSASRASVLMAAGTALSVPAGVACHMLALPRIDGFPLLWLVLC AFVLPGAWIQFSPRWGIGAFGYSVFFAAQLDVSNPIRYDDIALTNTWMAFLMASALLVLGFRVILPPDDRLDAARLAASI TRSLRRLALVLPDGPGTWVAWEGLQVQKTTRMVQRLALCMPPAERQARIDAALASVSLGRLVIRARRIADGPALAARDRA ALHAALGGFARLRRDPDGTARGLEGAADAMRAGADTGTDAGLAAWRVAACLDQAAHILRAVPGFFHRHGPLQLAPDMPGA RRTLAAPVPAYSVILGRVVHG >Mature_740_residues TGPVRSAPVWPRLVPAVFTDSVRWRDMGGRAAFCARVFASIGLALYCAFTFQLESPMSSVTTVMIVANPTVGALMSKSVW RIIGTVLGAAVSVALMAGLAQSPVLYVMVLAVAVAFACLVATFLRLFRAYAAVLSGYTIVIVAAPSYADPNGIFLSAMSR LSAVTVGIVATAIVFMATSPRRPQQVLTQIGQVMRDVVAHALAFHEFHQGAPVRDQAVAEPGLSGFRAMPVPLYDSRGAL LARIGGLGAAVEYAATDTYEIARRVNALRVGLSGLAGIVATYHPLWRGMDGDAPDLRRLHGRIAALMTELLDLMARPGWV DDPAPVRARIGAALDRLAADERAAAATDGTALLAAMDTVRDILAQLDTVMGILTGDAVPRRVRLRWFLDWPSALRNGARG GIITLLAGLIWYVLHWHSGPMLMLYIVAASSLISTTPSASRASVLMAAGTALSVPAGVACHMLALPRIDGFPLLWLVLCA FVLPGAWIQFSPRWGIGAFGYSVFFAAQLDVSNPIRYDDIALTNTWMAFLMASALLVLGFRVILPPDDRLDAARLAASIT RSLRRLALVLPDGPGTWVAWEGLQVQKTTRMVQRLALCMPPAERQARIDAALASVSLGRLVIRARRIADGPALAARDRAA LHAALGGFARLRRDPDGTARGLEGAADAMRAGADTGTDAGLAAWRVAACLDQAAHILRAVPGFFHRHGPLQLAPDMPGAR RTLAAPVPAYSVILGRVVHG
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=466, Percent_Identity=22.1030042918455, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 78770; Mature: 78639
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPVRSAPVWPRLVPAVFTDSVRWRDMGGRAAFCARVFASIGLALYCAFTFQLESPMSS CCCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VTTVMIVANPTVGALMSKSVWRIIGTVLGAAVSVALMAGLAQSPVLYVMVLAVAVAFACL HEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VATFLRLFRAYAAVLSGYTIVIVAAPSYADPNGIFLSAMSRLSAVTVGIVATAIVFMATS HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRRPQQVLTQIGQVMRDVVAHALAFHEFHQGAPVRDQAVAEPGLSGFRAMPVPLYDSRGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEECCCCCCCCCCH LLARIGGLGAAVEYAATDTYEIARRVNALRVGLSGLAGIVATYHPLWRGMDGDAPDLRRL HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HGRIAALMTELLDLMARPGWVDDPAPVRARIGAALDRLAADERAAAATDGTALLAAMDTV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RDILAQLDTVMGILTGDAVPRRVRLRWFLDWPSALRNGARGGIITLLAGLIWYVLHWHSG HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC PMLMLYIVAASSLISTTPSASRASVLMAAGTALSVPAGVACHMLALPRIDGFPLLWLVLC CHHHHHHHHHHHHHHCCCCCHHHHHHEECCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHH AFVLPGAWIQFSPRWGIGAFGYSVFFAAQLDVSNPIRYDDIALTNTWMAFLMASALLVLG HHHCCCCCEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC FRVILPPDDRLDAARLAASITRSLRRLALVLPDGPGTWVAWEGLQVQKTTRMVQRLALCM CEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHC PPAERQARIDAALASVSLGRLVIRARRIADGPALAARDRAALHAALGGFARLRRDPDGTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH RGLEGAADAMRAGADTGTDAGLAAWRVAACLDQAAHILRAVPGFFHRHGPLQLAPDMPGA HCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC RRTLAAPVPAYSVILGRVVHG CHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure TGPVRSAPVWPRLVPAVFTDSVRWRDMGGRAAFCARVFASIGLALYCAFTFQLESPMSS CCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VTTVMIVANPTVGALMSKSVWRIIGTVLGAAVSVALMAGLAQSPVLYVMVLAVAVAFACL HEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VATFLRLFRAYAAVLSGYTIVIVAAPSYADPNGIFLSAMSRLSAVTVGIVATAIVFMATS HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRRPQQVLTQIGQVMRDVVAHALAFHEFHQGAPVRDQAVAEPGLSGFRAMPVPLYDSRGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEECCCCCCCCCCH LLARIGGLGAAVEYAATDTYEIARRVNALRVGLSGLAGIVATYHPLWRGMDGDAPDLRRL HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HGRIAALMTELLDLMARPGWVDDPAPVRARIGAALDRLAADERAAAATDGTALLAAMDTV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RDILAQLDTVMGILTGDAVPRRVRLRWFLDWPSALRNGARGGIITLLAGLIWYVLHWHSG HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC PMLMLYIVAASSLISTTPSASRASVLMAAGTALSVPAGVACHMLALPRIDGFPLLWLVLC CHHHHHHHHHHHHHHCCCCCHHHHHHEECCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHH AFVLPGAWIQFSPRWGIGAFGYSVFFAAQLDVSNPIRYDDIALTNTWMAFLMASALLVLG HHHCCCCCEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC FRVILPPDDRLDAARLAASITRSLRRLALVLPDGPGTWVAWEGLQVQKTTRMVQRLALCM CEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHC PPAERQARIDAALASVSLGRLVIRARRIADGPALAARDRAALHAALGGFARLRRDPDGTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH RGLEGAADAMRAGADTGTDAGLAAWRVAACLDQAAHILRAVPGFFHRHGPLQLAPDMPGA HCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC RRTLAAPVPAYSVILGRVVHG CHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]