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The map label for this gene is marR [H]

Identifier: 162149521

GI number: 162149521

Start: 3842650

End: 3843138

Strand: Direct

Name: marR [H]

Synonym: GDI_3759

Alternate gene names: 162149521

Gene position: 3842650-3843138 (Clockwise)

Preceding gene: 162149518

Following gene: 162149522

Centisome position: 97.43

GC content: 71.17

Gene sequence:

>489_bases
GTGGGGCCGCGCGGCTTCCTGAATATCGACGAATCCCGGTTCCGGGACATGGCGGTGACCTTTCGCATCATGCGGCTGGG
CGCGGTGTGGCGCACCCGGCTGGAACGCGCGCTGAAGCCCACCGGGCTGAGCGTCGCCGGGTTCCGGCCGATGGCGTACC
TGATGATGATGCCGGACGGGACCTCGCAGCGGGACCTGGCGGCGGCGATGAACACCGATACCTCGGCCCTGGTGCGGGTG
CTGGACCTGCTGGAGGCCGCCAGCCTGGTGGAACGCCGGCCCGACGAAGCCGACCGGCGGGCCAACCGGCTGTTCATCAC
GCCCGAGGGGCGGAAAAAATGCCGCCAGTTCCACGAGATTTCCGCCCGGCTGGAGCGCGAGATGACGGCGGGCCTGCCGC
GTGAGGCCATTCCGGGGCTGGTGGGCCTGCTGGACCGCATCCTGCTGAATGCCGAGCGCGCGTCGGCCGCCGGCCGGGAC
GTGCCGTGA

Upstream 100 bases:

>100_bases
GGGAATCGGTTGCCATGAAACCAGTTGCCATGGCAATTAGTGCCTGGGCCATTATGGGTCCGGCGCCGGAGAAGGAGGAA
TCGTGGATCGGGATGAGGGG

Downstream 100 bases:

>100_bases
CCGGACCGGTCCGGTCGGCCCCGGTGTGGCCGCGCCTTGTGCCGGCGGTGTTCACCGACTCCGTGCGCTGGCGGGACATG
GGGGGCCGCGCGGCGTTCTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MGPRGFLNIDESRFRDMAVTFRIMRLGAVWRTRLERALKPTGLSVAGFRPMAYLMMMPDGTSQRDLAAAMNTDTSALVRV
LDLLEAASLVERRPDEADRRANRLFITPEGRKKCRQFHEISARLEREMTAGLPREAIPGLVGLLDRILLNAERASAAGRD
VP

Sequences:

>Translated_162_residues
MGPRGFLNIDESRFRDMAVTFRIMRLGAVWRTRLERALKPTGLSVAGFRPMAYLMMMPDGTSQRDLAAAMNTDTSALVRV
LDLLEAASLVERRPDEADRRANRLFITPEGRKKCRQFHEISARLEREMTAGLPREAIPGLVGLLDRILLNAERASAAGRD
VP
>Mature_161_residues
GPRGFLNIDESRFRDMAVTFRIMRLGAVWRTRLERALKPTGLSVAGFRPMAYLMMMPDGTSQRDLAAAMNTDTSALVRVL
DLLEAASLVERRPDEADRRANRLFITPEGRKKCRQFHEISARLEREMTAGLPREAIPGLVGLLDRILLNAERASAAGRDV
P

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=134, Percent_Identity=27.6119402985075, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18165; Mature: 18034

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRGFLNIDESRFRDMAVTFRIMRLGAVWRTRLERALKPTGLSVAGFRPMAYLMMMPDG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCC
TSQRDLAAAMNTDTSALVRVLDLLEAASLVERRPDEADRRANRLFITPEGRKKCRQFHEI
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCHHHHHHHHHHH
SARLEREMTAGLPREAIPGLVGLLDRILLNAERASAAGRDVP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GPRGFLNIDESRFRDMAVTFRIMRLGAVWRTRLERALKPTGLSVAGFRPMAYLMMMPDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCC
TSQRDLAAAMNTDTSALVRVLDLLEAASLVERRPDEADRRANRLFITPEGRKKCRQFHEI
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCHHHHHHHHHHH
SARLEREMTAGLPREAIPGLVGLLDRILLNAERASAAGRDVP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA