Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149392
Identifier: 162149392
GI number: 162149392
Start: 3708112
End: 3708489
Strand: Direct
Name: 162149392
Synonym: GDI_3629
Alternate gene names: NA
Gene position: 3708112-3708489 (Clockwise)
Preceding gene: 162149391
Following gene: 162149396
Centisome position: 94.02
GC content: 64.29
Gene sequence:
>378_bases ATGGCGCGTCCTTATTCGATGGATCTTCGCGACCGGGTTGTGGCAGCCGTGGAGACAGACGGCCTCTCCTGCCACGAGGC CGCGAAGCGCTACGGTGTAGCACCCAGCACCGCGATCCGGTGGATGCAGAGCTTTCGGCGGACCGGCAGCGTTTCCCCTG GCCAGATGGGCGGCCACAAGCCGAAACGGCTGACGGGTGCGCATCGGGAATGGCTGATCGAGCGTTGCAAGGCGGGGGGC TTTACCCTGCGGGGCTTGGTCGCAGAACTTGCCGGGCGCGGGCTCAGGGTCGATTATCGCTCTGTGTGGGTCTTCGTCCA CGACGAGGGGCTCAGCTTCAAAAAAAACACTCGTCGCAGCCGAACAGGACCGTCCTGA
Upstream 100 bases:
>100_bases GCCTGCTAGAGCGTGATGATTTCGGTCTGAATCGGAATATGGGTACCCAGATTGCCGAAAATCTGATTCAACATGCTGTC TGGATTGGAGGCCAGCATGG
Downstream 100 bases:
>100_bases TGTCGCCCGACACCGGGCGCGATGGCAAAAATACCAACACCTCATAGATCCCGCCCGCCTGGTGTTCATCGATGAAACCT GGACCAAAACCAATATGGCG
Product: transposase
Products: NA
Alternate protein names: ISSpo6 Transposase Orf A; Insertion Sequence Transposase Protein; Transposase Of Insertion Sequence; Transposase IS; Transposase And Inactivated Derivatives-Like Protein
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGG FTLRGLVAELAGRGLRVDYRSVWVFVHDEGLSFKKNTRRSRTGPS
Sequences:
>Translated_125_residues MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGG FTLRGLVAELAGRGLRVDYRSVWVFVHDEGLSFKKNTRRSRTGPS >Mature_124_residues ARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGGF TLRGLVAELAGRGLRVDYRSVWVFVHDEGLSFKKNTRRSRTGPS
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13960; Mature: 13829
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHK CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PKRLTGAHREWLIERCKAGGFTLRGLVAELAGRGLRVDYRSVWVFVHDEGLSFKKNTRRS CCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCC RTGPS CCCCC >Mature Secondary Structure ARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHK CCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PKRLTGAHREWLIERCKAGGFTLRGLVAELAGRGLRVDYRSVWVFVHDEGLSFKKNTRRS CCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCC RTGPS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA