Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149391
Identifier: 162149391
GI number: 162149391
Start: 3707265
End: 3707963
Strand: Direct
Name: 162149391
Synonym: GDI_3628
Alternate gene names: NA
Gene position: 3707265-3707963 (Clockwise)
Preceding gene: 162149389
Following gene: 162149392
Centisome position: 93.99
GC content: 62.52
Gene sequence:
>699_bases TTGAGCTTCAGCAGACACCATCCGTCAGATTTAGTCGAGACTTCTACATTTGATGCGAAGCGGGGACGGCGCGGTCGGCC GCCGAAAGAACCGGACGATGAACCGCCACCAGACCGGCAGATCAACCTGACCGATCCGGACAGCAAGCTGATGCGCCGCT CCGACGCGCATGAATACCGGCAAGCCTACAATGCCCAGGCCGTGGTTTGTGCCGAGGGCAGCCAGTTGATCTTGGAAAAT GGCGTCGTTGCGACGACGGCGGACGCGCCCAGCTTCGCCGCCACCATCCTGGGTATGGAGGAGAGGATCGGCCTGCCACG AACCGTCCTCGCCGACACGGGTTTCGCCAGCGGCAAAGCCGTCGAAACGTTGCAGGCCAGCGGCGTGGACCCGCTGGTCG CCATCGGACGCCCTGTGAATCGGCGCCCTTATGACTTCCGGCCAGAACCGCCACCCAGGGAGCCGCGCCGGATCACCGAG CCCTGGCGCCTGGAAATGAAGGCCAGGCTGCAACAGAACCCGGCAAAAGCCCTTTACGCCTTACGCAAGCAGACCGTCGA ACCGGTCTTCGGTATCATCAAGAGCGCCATGGGCTTCACCCGTTTCCATCTCCGTGGCCTCCCCAACGTCGCAACAGAAT GGACGCTCGTCGCCCTCGCATATAATTGCCGTAGGATCACGCGACTGACGGCCGCATAA
Upstream 100 bases:
>100_bases CGGCAGACCGCCCACTCGTCGTTCTGTTCGAGCATCAGCGCGCCGACGAGGCGGATAATGGCGGCATCGTTGGGGAAAAT GCCGATGACGTCAGCCCTGG
Downstream 100 bases:
>100_bases ACGCCGTCGTCGCCATCACTCATCACTACGGCAGCGCCCAATCCGACAGCCTGCTAGAGCGTGATGATTTCGGTCTGAAT CGGAATATGGGTACCCAGAT
Product: transposase
Products: NA
Alternate protein names: Transposase; ISKpn6-Like Transposase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSFSRHHPSDLVETSTFDAKRGRRGRPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILEN GVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITE PWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA
Sequences:
>Translated_232_residues MSFSRHHPSDLVETSTFDAKRGRRGRPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILEN GVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITE PWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA >Mature_231_residues SFSRHHPSDLVETSTFDAKRGRRGRPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENG VVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEP WRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25881; Mature: 25750
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSRHHPSDLVETSTFDAKRGRRGRPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYR CCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH QAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKA HHCCCCEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCH VETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYA HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH LRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFSRHHPSDLVETSTFDAKRGRRGRPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYR CCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH QAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLPRTVLADTGFASGKA HHCCCCEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCH VETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYA HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH LRKQTVEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA