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The map label for this gene is clpS [H]

Identifier: 162149242

GI number: 162149242

Start: 3572681

End: 3573121

Strand: Direct

Name: clpS [H]

Synonym: GDI_3474

Alternate gene names: 162149242

Gene position: 3572681-3573121 (Clockwise)

Preceding gene: 162149238

Following gene: 162149244

Centisome position: 90.58

GC content: 64.17

Gene sequence:

>441_bases
ATGGCTGCTTCATTTCCTCCCGTCCGGCATTCGATGACCGCCCCCCGCGACGCATGGCCACGCGGGCACACGCGGGCCCA
TGGCGGCAATTCCCCGACGCGACGCGAGGGCGGCAACCAGGACGGACAATCCGACAATCCGGATTCGCCCACCATCGGCG
TGGTCGTCAGAACCCGGCCGCAGACGCGCAAGCCCGCGATGTACAAGGTCCTGATGCTGAACGACGACTACACGCCGATG
GAATTCGTCGTGCACGTGCTGGAACGCTTCTTCCAGAAGTCGCGGGACGAGGCGACCGACATCATGCTGCATGTCCACAA
GCGGGGCGTGGGCGTCTGCGGCGTGTTCACCTACGAGGTCGCGGAGACGAAAGTGACCCAGGTCATGGACCTCGCACGGC
AGAACCAGCACCCGCTGCAATGCACCATCGAAAAGGACTAG

Upstream 100 bases:

>100_bases
CACGCGACAGCCGATTTGATCATCGTTCCGCCGCAAAACATGCTTAATTTCCCTCTCCGCGCTCTTTCAACCCGCCACGC
CCATCCAATATGGTAAGACC

Downstream 100 bases:

>100_bases
ACGGGGACGGAACGACGCGGCGGCGGACAGTCCATGGGGCCACGCGTCTCCGCGCGCCCCTGCCGTCCCGCCTTCGCGAA
ACGCGCCCGGAATTTGTTGA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAASFPPVRHSMTAPRDAWPRGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRPQTRKPAMYKVLMLNDDYTPM
EFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQCTIEKD

Sequences:

>Translated_146_residues
MAASFPPVRHSMTAPRDAWPRGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRPQTRKPAMYKVLMLNDDYTPM
EFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQCTIEKD
>Mature_145_residues
AASFPPVRHSMTAPRDAWPRGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRPQTRKPAMYKVLMLNDDYTPME
FVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQCTIEKD

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=89, Percent_Identity=56.1797752808989, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 16484; Mature: 16353

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASFPPVRHSMTAPRDAWPRGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
QTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEV
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEHHH
AETKVTQVMDLARQNQHPLQCTIEKD
HHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
AASFPPVRHSMTAPRDAWPRGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
QTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEV
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEHHH
AETKVTQVMDLARQNQHPLQCTIEKD
HHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA