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The map label for this gene is nudC [H]

Identifier: 162149238

GI number: 162149238

Start: 3567398

End: 3568342

Strand: Direct

Name: nudC [H]

Synonym: GDI_3470

Alternate gene names: 162149238

Gene position: 3567398-3568342 (Clockwise)

Preceding gene: 162149237

Following gene: 162149242

Centisome position: 90.45

GC content: 70.16

Gene sequence:

>945_bases
ATGACGATGACCCCTTACAGGCCCGGCCGGAACGGTGGGAATTTCTATTCCGGCAGCCCGGTGGACCGCGCCGCGCAGGA
TCGCGCCGACGCCGCCCGCATCGCATCGTATCTGGCTTGCGGGGACACGCTGCTGGTCCCGTGCTGGCACGGCCGGCACC
TGATCGTGCAGGATGGGGACGATTCGGCGCGGATCGAACTGCCGGCGCGGCGCTCGGCGCTGCTGACGCCGGAGATCCTG
GACCGGTCGAACTGGGTCTTCCTCGGCTATCTGGACGGACGCCCGCTGTTCGTCGTGGATCTGAGCCTGCTGGACCAGCC
GGAACTGGTGTTTCCCCACGCACGCGGCACGTTCCGCGAACTGCGCCCCCTCGCCGGCCTGCTGCCGCCGGACGAGGCCG
CGATCCTGGCCCAGGCGCGCGGCATGGTGCACTGGCGCGCGCACAGCCGGTTCTGCGGCACCTGCGGCGCGCCGAACCGG
CCGGACCAGGCCGGGCACCGGCTTGCCTGCACCACCGAGCCCACGCACCTGCATTTTCCGCGCACCGACCCGGTGGTGAT
CATGCTGGTCCAGCGGCAGGACCGGGTGCTGCTGGCGCGCGGCACCCGCTTCGGCACCGAAAGCCGCACCCTGTCGGCGC
TGGCGGGCTTCGTCGAACCGGGCGAGACGCCCGAGGAAGCCGTGGCCCGCGAGGTCATGGAGGAAGTCGGACTCCCGGTG
GACACCATCCGCTATCATTCGGCCCAGCCCTGGCCGTATCCGGGAACCCTGATGCTGGCCTTCACCGCCATCGCCCACAC
CGATGCGCTGCATCTGGACCCTGAGGAAATCGTGGAAGCCCGGTGGCTGACCCGCGACGATGTGCGCAACCATGCCGCAC
TGGGTTTCACCCTGCCCGGGCCGACGACCATCGCCCGGCGGATGATCGACGACTGGCTGGAATAG

Upstream 100 bases:

>100_bases
GTTGGCAAGGCGCTCGTCCATCGCCGATCTCCCGGCGCCTTCTTAACACGCAACCGGGTGTCGGGCACAAGAGGGTAGAA
ACGAGATTGGGAGTCCGGCG

Downstream 100 bases:

>100_bases
GGCCTACTCCCCGACGGCTGCCCCCCCGGCATGGCGCCGGTCGAACCCGCCATAATAGCGCGCCCCGCCCGTCGCGGCCG
CACCCAGGCGCGGGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTMTPYRPGRNGGNFYSGSPVDRAAQDRADAARIASYLACGDTLLVPCWHGRHLIVQDGDDSARIELPARRSALLTPEIL
DRSNWVFLGYLDGRPLFVVDLSLLDQPELVFPHARGTFRELRPLAGLLPPDEAAILAQARGMVHWRAHSRFCGTCGAPNR
PDQAGHRLACTTEPTHLHFPRTDPVVIMLVQRQDRVLLARGTRFGTESRTLSALAGFVEPGETPEEAVAREVMEEVGLPV
DTIRYHSAQPWPYPGTLMLAFTAIAHTDALHLDPEEIVEARWLTRDDVRNHAALGFTLPGPTTIARRMIDDWLE

Sequences:

>Translated_314_residues
MTMTPYRPGRNGGNFYSGSPVDRAAQDRADAARIASYLACGDTLLVPCWHGRHLIVQDGDDSARIELPARRSALLTPEIL
DRSNWVFLGYLDGRPLFVVDLSLLDQPELVFPHARGTFRELRPLAGLLPPDEAAILAQARGMVHWRAHSRFCGTCGAPNR
PDQAGHRLACTTEPTHLHFPRTDPVVIMLVQRQDRVLLARGTRFGTESRTLSALAGFVEPGETPEEAVAREVMEEVGLPV
DTIRYHSAQPWPYPGTLMLAFTAIAHTDALHLDPEEIVEARWLTRDDVRNHAALGFTLPGPTTIARRMIDDWLE
>Mature_313_residues
TMTPYRPGRNGGNFYSGSPVDRAAQDRADAARIASYLACGDTLLVPCWHGRHLIVQDGDDSARIELPARRSALLTPEILD
RSNWVFLGYLDGRPLFVVDLSLLDQPELVFPHARGTFRELRPLAGLLPPDEAAILAQARGMVHWRAHSRFCGTCGAPNRP
DQAGHRLACTTEPTHLHFPRTDPVVIMLVQRQDRVLLARGTRFGTESRTLSALAGFVEPGETPEEAVAREVMEEVGLPVD
TIRYHSAQPWPYPGTLMLAFTAIAHTDALHLDPEEIVEARWLTRDDVRNHAALGFTLPGPTTIARRMIDDWLE

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=199, Percent_Identity=38.1909547738693, Blast_Score=138, Evalue=7e-33,
Organism=Homo sapiens, GI50593112, Length=242, Percent_Identity=31.8181818181818, Blast_Score=122, Evalue=3e-28,
Organism=Escherichia coli, GI48994995, Length=167, Percent_Identity=41.3173652694611, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI212645999, Length=172, Percent_Identity=33.7209302325581, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71986510, Length=172, Percent_Identity=33.7209302325581, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321371, Length=369, Percent_Identity=25.4742547425474, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 34901; Mature: 34770

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTPYRPGRNGGNFYSGSPVDRAAQDRADAARIASYLACGDTLLVPCWHGRHLIVQDGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCC
DSARIELPARRSALLTPEILDRSNWVFLGYLDGRPLFVVDLSLLDQPELVFPHARGTFRE
CCCEEECCCCCCCCCCHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCEEECCCCCHHHH
LRPLAGLLPPDEAAILAQARGMVHWRAHSRFCGTCGAPNRPDQAGHRLACTTEPTHLHFP
HHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHCCEEEEECCCCEEECC
RTDPVVIMLVQRQDRVLLARGTRFGTESRTLSALAGFVEPGETPEEAVAREVMEEVGLPV
CCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
DTIRYHSAQPWPYPGTLMLAFTAIAHTDALHLDPEEIVEARWLTRDDVRNHAALGFTLPG
HHHEECCCCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHCCCEEEEEECCC
PTTIARRMIDDWLE
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TMTPYRPGRNGGNFYSGSPVDRAAQDRADAARIASYLACGDTLLVPCWHGRHLIVQDGD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCC
DSARIELPARRSALLTPEILDRSNWVFLGYLDGRPLFVVDLSLLDQPELVFPHARGTFRE
CCCEEECCCCCCCCCCHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCEEECCCCCHHHH
LRPLAGLLPPDEAAILAQARGMVHWRAHSRFCGTCGAPNRPDQAGHRLACTTEPTHLHFP
HHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHCCEEEEECCCCEEECC
RTDPVVIMLVQRQDRVLLARGTRFGTESRTLSALAGFVEPGETPEEAVAREVMEEVGLPV
CCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
DTIRYHSAQPWPYPGTLMLAFTAIAHTDALHLDPEEIVEARWLTRDDVRNHAALGFTLPG
HHHEECCCCCCCCCCHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHCCCEEEEEECCC
PTTIARRMIDDWLE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]