Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is bcp [H]
Identifier: 162149196
GI number: 162149196
Start: 3530628
End: 3531113
Strand: Direct
Name: bcp [H]
Synonym: GDI_3426
Alternate gene names: 162149196
Gene position: 3530628-3531113 (Clockwise)
Preceding gene: 162149195
Following gene: 162149202
Centisome position: 89.52
GC content: 68.93
Gene sequence:
>486_bases ATGCCGGACAGCACCACCCCGACTTTCCCCGCCCCGGGCGCGCCCGTGCCGGATTTCGACATGCCGGCCAGCCGGGGGCG GCATGTCCGCCTGGCGGACATGCGCGGCCGACCCTTCATCCTGTATTTCTACCCCAAGGCCAGCACCCCGGGCTGCACCA CCGAGGCCTGCGGCTTCCAGGAAGCCCTGGCGGCCCTGGGGGGCACCGGCATCCCGGTCATCGGCGTGTCGCGGGATTCG ATGAAGGCCATCGACACCTTCGCCGACAAGCAGGGCCTGGATTTCCCGCTGGCCTCCGACGCCACCGGCACGGTGACGGA AGCGTACGGCGTCTGGGTCGAAAAATCCCAGTACGGACGGAAATACATGGGCATCGAACGCGCGACCTTCCTGGTCGACG CCGAAGGCCGGCTGGTACGGACCTGGCGCAACGTCAAGGTGCCGGGGCATGTCGCCGAGGTCATGACGGCGGCGGCCACC CTCTGA
Upstream 100 bases:
>100_bases GGTGCGCGCGGCCTTCGTAACCCTGATCGGGCCGGTCGAAGCGGACTTGCAGGGGCCGGCAAAGGCGGCGAAGTAGAAGG GACGAAAACGGAGGACGACG
Downstream 100 bases:
>100_bases CCGCCGCCGCCGGGCCTCACCGCCAGGCCTCAATAGCCCGGATAGCCGTATCCGTAGGGCTGGACGTACGCCACCGGCGG GGGTGGCGGAGGCGGAGGCG
Product: peroxiredoxin bcp
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPDSTTPTFPAPGAPVPDFDMPASRGRHVRLADMRGRPFILYFYPKASTPGCTTEACGFQEALAALGGTGIPVIGVSRDS MKAIDTFADKQGLDFPLASDATGTVTEAYGVWVEKSQYGRKYMGIERATFLVDAEGRLVRTWRNVKVPGHVAEVMTAAAT L
Sequences:
>Translated_161_residues MPDSTTPTFPAPGAPVPDFDMPASRGRHVRLADMRGRPFILYFYPKASTPGCTTEACGFQEALAALGGTGIPVIGVSRDS MKAIDTFADKQGLDFPLASDATGTVTEAYGVWVEKSQYGRKYMGIERATFLVDAEGRLVRTWRNVKVPGHVAEVMTAAAT L >Mature_160_residues PDSTTPTFPAPGAPVPDFDMPASRGRHVRLADMRGRPFILYFYPKASTPGCTTEACGFQEALAALGGTGIPVIGVSRDSM KAIDTFADKQGLDFPLASDATGTVTEAYGVWVEKSQYGRKYMGIERATFLVDAEGRLVRTWRNVKVPGHVAEVMTAAATL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=144, Percent_Identity=40.2777777777778, Blast_Score=128, Evalue=2e-31,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17288; Mature: 17157
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSTTPTFPAPGAPVPDFDMPASRGRHVRLADMRGRPFILYFYPKASTPGCTTEACGFQ CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHCCHH EALAALGGTGIPVIGVSRDSMKAIDTFADKQGLDFPLASDATGTVTEAYGVWVEKSQYGR HHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHEEEEECCCCCC KYMGIERATFLVDAEGRLVRTWRNVKVPGHVAEVMTAAATL HHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure PDSTTPTFPAPGAPVPDFDMPASRGRHVRLADMRGRPFILYFYPKASTPGCTTEACGFQ CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHCCHH EALAALGGTGIPVIGVSRDSMKAIDTFADKQGLDFPLASDATGTVTEAYGVWVEKSQYGR HHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHEEEEECCCCCC KYMGIERATFLVDAEGRLVRTWRNVKVPGHVAEVMTAAATL HHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]