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The map label for this gene is yvfS [H]

Identifier: 162146988

GI number: 162146988

Start: 1188009

End: 1188761

Strand: Direct

Name: yvfS [H]

Synonym: GDI_1193

Alternate gene names: 162146988

Gene position: 1188009-1188761 (Clockwise)

Preceding gene: 162146987

Following gene: 162146989

Centisome position: 30.12

GC content: 69.85

Gene sequence:

>753_bases
ATGACCGACCTCGCCTTGCCCGCCGGCATCTATGGCCGCGAATGCGCCGCCGAGCTGAAACGCTCCTGGCGCCTGCCGCA
ATTCATCGTCCCGACCGTCCTGACCCCCGCCGCCTTCTACGCCCTGTTCACGCTTGCCATCCCCGCGCACCCGTCGCCAT
CGGAAGCCACCGCCACCCTGGCGACCTATGGCGTCTTTGCCGCCATAGGTCCGGCGCTGTTCGGCTTCGGCGCCGGCATC
GCGTCGGAACGCGAACAGGGGCTGATCGAACTCAAGCGCGTCTCCCCCATGCCTGCCGGGGCCTATGTCGCGGCGAAACT
CGTCGCCACCCTTGCCGCCACGGCCGCCGCCATCATGCTGATCGACGCCCTCAGCCTGATTGCCGGTGTCAGGCTGACCG
CCGCGCAATGGGGCGCCCTGACACTGCTCCACCTCGCATCGGCCATCCCGTTCGCCCTGGTCGGCTTCGGAATCGGCATG
CGCATGAGCGCAAAGGGGGCGGTCGCACTCGCCAATGTCCTGTTCCTGGGGTCCGCCATCCTGGGCGGCCTGTGGTTTCC
CTCGCAGTTACTGCCGGGGTGGATGCGCGCCATCGGCGAGGTGCTGCCCTCGTACCACCTGGGGCAACTGGCCCGCTTCC
TGGTCGGCGCCGACACGATCGGAACCGTCGCCACGCACGCCGCCGCCCTGCTGGCCATGACAGCCGCCGCCTTCCTCTGG
GCCCGGGCCGGCTGGCGCAGGAGCGCCGCTTGA

Upstream 100 bases:

>100_bases
TGTGCGACCGCGACCCGGCCCTGGCCGCCCTGCGCATCCACGACGCCACGCTCGAAGACGCCATCGCCATCCTCCTCACC
CCGGAAAAGGGCCTCGCCGC

Downstream 100 bases:

>100_bases
CGCCCGCCCCCGCCACACGCAACGATCCGACGATGCACACACGGGGCGAGCGCTGGTGGGAGGGGCCATGGCCCTGGCTC
GTCTACCTGATCTTCTACGT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTDLALPAGIYGRECAAELKRSWRLPQFIVPTVLTPAAFYALFTLAIPAHPSPSEATATLATYGVFAAIGPALFGFGAGI
ASEREQGLIELKRVSPMPAGAYVAAKLVATLAATAAAIMLIDALSLIAGVRLTAAQWGALTLLHLASAIPFALVGFGIGM
RMSAKGAVALANVLFLGSAILGGLWFPSQLLPGWMRAIGEVLPSYHLGQLARFLVGADTIGTVATHAAALLAMTAAAFLW
ARAGWRRSAA

Sequences:

>Translated_250_residues
MTDLALPAGIYGRECAAELKRSWRLPQFIVPTVLTPAAFYALFTLAIPAHPSPSEATATLATYGVFAAIGPALFGFGAGI
ASEREQGLIELKRVSPMPAGAYVAAKLVATLAATAAAIMLIDALSLIAGVRLTAAQWGALTLLHLASAIPFALVGFGIGM
RMSAKGAVALANVLFLGSAILGGLWFPSQLLPGWMRAIGEVLPSYHLGQLARFLVGADTIGTVATHAAALLAMTAAAFLW
ARAGWRRSAA
>Mature_249_residues
TDLALPAGIYGRECAAELKRSWRLPQFIVPTVLTPAAFYALFTLAIPAHPSPSEATATLATYGVFAAIGPALFGFGAGIA
SEREQGLIELKRVSPMPAGAYVAAKLVATLAATAAAIMLIDALSLIAGVRLTAAQWGALTLLHLASAIPFALVGFGIGMR
MSAKGAVALANVLFLGSAILGGLWFPSQLLPGWMRAIGEVLPSYHLGQLARFLVGADTIGTVATHAAALLAMTAAAFLWA
RAGWRRSAA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 25825; Mature: 25694

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLALPAGIYGRECAAELKRSWRLPQFIVPTVLTPAAFYALFTLAIPAHPSPSEATATL
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ATYGVFAAIGPALFGFGAGIASEREQGLIELKRVSPMPAGAYVAAKLVATLAATAAAIML
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IDALSLIAGVRLTAAQWGALTLLHLASAIPFALVGFGIGMRMSAKGAVALANVLFLGSAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LGGLWFPSQLLPGWMRAIGEVLPSYHLGQLARFLVGADTIGTVATHAAALLAMTAAAFLW
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ARAGWRRSAA
HHHCCCCCCC
>Mature Secondary Structure 
TDLALPAGIYGRECAAELKRSWRLPQFIVPTVLTPAAFYALFTLAIPAHPSPSEATATL
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ATYGVFAAIGPALFGFGAGIASEREQGLIELKRVSPMPAGAYVAAKLVATLAATAAAIML
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IDALSLIAGVRLTAAQWGALTLLHLASAIPFALVGFGIGMRMSAKGAVALANVLFLGSAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LGGLWFPSQLLPGWMRAIGEVLPSYHLGQLARFLVGADTIGTVATHAAALLAMTAAAFLW
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ARAGWRRSAA
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]