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The map label for this gene is vacJ [C]

Identifier: 162146687

GI number: 162146687

Start: 881587

End: 882309

Strand: Reverse

Name: vacJ [C]

Synonym: GDI_0865

Alternate gene names: 162146687

Gene position: 882309-881587 (Counterclockwise)

Preceding gene: 162146690

Following gene: 162146686

Centisome position: 22.37

GC content: 65.15

Gene sequence:

>723_bases
GTGCTGGCCACGCTGGCGGGCTGCGCGGCCCCGCCGCCCAAGGACCCGGACGAACTGGCCGAATATCGCGAGGCCAACGA
TCCGTATGAGTCGATGAACCGCAAGTTCTACGACATCACCATGAAGCTGGACAAATACTCCCTGCGTCCGGTCGCACAGG
CGTATGTCTGGGCCGTGCCCTATCGCGTGCGGCAGTCGATGGGCAACATGTCCCAGACGATGAACGAGCCCGTGGTGTTC
TTCACCGATGTCGGCGCCGGCAAGCCCCGCCGCGCGGGTGATGCCTTCGTGCGGTGGTGCATCAACATGGTCGCCGGCAT
CGGCGGGCTGATCGATGTCGCGAAATATGCCGGCTACCCCCATCACGACGACGATGCGGGGCTGACGCTGGCGACATGGG
GCGTGCCGTCGGGCCCCTATCTGTTCCTGCCGATGATGGGCCCGTCCTCGTTCCGCGACGGGATCGGCTACGGCATCGAT
GTCGGCCTGTCGCCGTGGAACTATGTGCCCAGCGGCTACGGCCTGCTGACGTTCAACTGGGCCTACAACATCATGGGCAT
GATCAACGCCAGGGCCGACCATCTGGACGCGCTGGACCAGTTGCAGAAGGACGCGCTGGACCCCTACGCCACCATCCGCA
GCGCCTATCAGCAGCAGCGCAAGGCCCTGGCCGACACCATCAGCCACGACCGCCGGGCCACCGTGCCCGACTGGTACAAT
TAA

Upstream 100 bases:

>100_bases
AATGACAGGATCGATCTTTTCACCGTCCCGGTCATCCGCCTCTGCCCGCCGTCCGCGCCTGGTCGCCCGCCTGATCGCCG
GCCTGGGAGTATCCGGCCTG

Downstream 100 bases:

>100_bases
GAAGGAGACGCAGAGATGAAGACAGCCCTTACCCGTCGTCATGCGCTGGGTCTCGTTCCGCCAGCGCCCGCGCCTTCGTC
AACGATTTCGGCCTCCGGTT

Product: lipoprotein vacJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLATLAGCAAPPPKDPDELAEYREANDPYESMNRKFYDITMKLDKYSLRPVAQAYVWAVPYRVRQSMGNMSQTMNEPVVF
FTDVGAGKPRRAGDAFVRWCINMVAGIGGLIDVAKYAGYPHHDDDAGLTLATWGVPSGPYLFLPMMGPSSFRDGIGYGID
VGLSPWNYVPSGYGLLTFNWAYNIMGMINARADHLDALDQLQKDALDPYATIRSAYQQQRKALADTISHDRRATVPDWYN

Sequences:

>Translated_240_residues
MLATLAGCAAPPPKDPDELAEYREANDPYESMNRKFYDITMKLDKYSLRPVAQAYVWAVPYRVRQSMGNMSQTMNEPVVF
FTDVGAGKPRRAGDAFVRWCINMVAGIGGLIDVAKYAGYPHHDDDAGLTLATWGVPSGPYLFLPMMGPSSFRDGIGYGID
VGLSPWNYVPSGYGLLTFNWAYNIMGMINARADHLDALDQLQKDALDPYATIRSAYQQQRKALADTISHDRRATVPDWYN
>Mature_240_residues
MLATLAGCAAPPPKDPDELAEYREANDPYESMNRKFYDITMKLDKYSLRPVAQAYVWAVPYRVRQSMGNMSQTMNEPVVF
FTDVGAGKPRRAGDAFVRWCINMVAGIGGLIDVAKYAGYPHHDDDAGLTLATWGVPSGPYLFLPMMGPSSFRDGIGYGID
VGLSPWNYVPSGYGLLTFNWAYNIMGMINARADHLDALDQLQKDALDPYATIRSAYQQQRKALADTISHDRRATVPDWYN

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=231, Percent_Identity=32.9004329004329, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 26749; Mature: 26749

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATLAGCAAPPPKDPDELAEYREANDPYESMNRKFYDITMKLDKYSLRPVAQAYVWAVP
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHH
YRVRQSMGNMSQTMNEPVVFFTDVGAGKPRRAGDAFVRWCINMVAGIGGLIDVAKYAGYP
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HHDDDAGLTLATWGVPSGPYLFLPMMGPSSFRDGIGYGIDVGLSPWNYVPSGYGLLTFNW
CCCCCCCEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEECCCCCCCCCCCCCEEEEEEH
AYNIMGMINARADHLDALDQLQKDALDPYATIRSAYQQQRKALADTISHDRRATVPDWYN
HHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLATLAGCAAPPPKDPDELAEYREANDPYESMNRKFYDITMKLDKYSLRPVAQAYVWAVP
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHH
YRVRQSMGNMSQTMNEPVVFFTDVGAGKPRRAGDAFVRWCINMVAGIGGLIDVAKYAGYP
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HHDDDAGLTLATWGVPSGPYLFLPMMGPSSFRDGIGYGIDVGLSPWNYVPSGYGLLTFNW
CCCCCCCEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEECCCCCCCCCCCCCEEEEEEH
AYNIMGMINARADHLDALDQLQKDALDPYATIRSAYQQQRKALADTISHDRRATVPDWYN
HHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]