Click here to switch to the map view.

The map label for this gene is 161870948

Identifier: 161870948

GI number: 161870948

Start: 2085311

End: 2085970

Strand: Reverse

Name: 161870948

Synonym: NMCC_2042

Alternate gene names: NA

Gene position: 2085970-2085311 (Counterclockwise)

Preceding gene: 161870949

Following gene: 161870947

Centisome position: 96.87

GC content: 53.03

Gene sequence:

>660_bases
ATGCACGCTTCTGTCCAAAGCCGTTTCGCACCGATACTTTATGTTTTGATTTTCTTTGCCGGTTTTTTGACCGCGCAAAT
CTGGTTCAATCAGAAAGCCTATACTGAAGAGCTGCCTCCGCTTCTGTCCGCATTGTCCGCCGTCGCGCTGGTGTGGCTGG
CGTGGGCGTTCGTGTCGGCGCGTTCAAAGGCTAAGGCGGAAAAGTTCTACCGCGAAAAAATGATACAGAACGAAAGCATA
CACCCCGTCCTGCACGCTTCTTTGCAACACTTGGAACACAAGCCGCAAATGCTCGCCCTGCTGGTCAAAAACCACGGTAA
AGGGATGGCGGAACAGGTCAGGTTTAAGGCGGAAGTGCTGCCCGACGACGAAGACGCGCGCACGATTGCCGCCGAGTTGG
CAAAAATGGATATGTTCGCATTGGGGACGGACGCGGTCGCCTCGGGCGAAACCTATGGACGCGTGTTCGCCGATATTTTC
GAGTTGTCGGCGGCTTTGGAAGGGCGCGCGTTCAAAGGAATGTTGAAACTGACGGCGGAATATAAAAACATCTTCGGCGA
TGCCTGCAGTTCGGAAACGGCGTTGGAGTTGGGCGCGCTCAATCAGGCGTTGCAGGAGATTTCAAAAACATCGGAAAAGT
CCAAACGGATATTTTATTGA

Upstream 100 bases:

>100_bases
TACAGCCGGGATTCGGTGGCGGAAGCCTGACGGATTCCCTTAAACCGAGTGGGCGGCATTTCGTCTGCCGCCTGTTTTGC
CAATCTGAAATGGAATGATG

Downstream 100 bases:

>100_bases
AGATGGAAAAATGCCGTCTGAAACGGAAGGTGTTTCAGACGGCATTTTTGTCGGATGATTAATTATTCGGAGCGGTTGAA
GCCAAACTTCACGCGGCTGC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESI
HPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIF
ELSAALEGRAFKGMLKLTAEYKNIFGDACSSETALELGALNQALQEISKTSEKSKRIFY

Sequences:

>Translated_219_residues
MHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESI
HPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIF
ELSAALEGRAFKGMLKLTAEYKNIFGDACSSETALELGALNQALQEISKTSEKSKRIFY
>Mature_219_residues
MHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESI
HPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIF
ELSAALEGRAFKGMLKLTAEYKNIFGDACSSETALELGALNQALQEISKTSEKSKRIFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24392; Mature: 24392

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFVSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAEVL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCC
PDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLTAE
CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YKNIFGDACSSETALELGALNQALQEISKTSEKSKRIFY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFVSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAEVL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCC
PDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLTAE
CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YKNIFGDACSSETALELGALNQALQEISKTSEKSKRIFY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA