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The map label for this gene is dadA [H]

Identifier: 161870887

GI number: 161870887

Start: 2028353

End: 2029609

Strand: Direct

Name: dadA [H]

Synonym: NMCC_1976

Alternate gene names: 161870887

Gene position: 2028353-2029609 (Clockwise)

Preceding gene: 161870886

Following gene: 161870888

Centisome position: 94.19

GC content: 54.65

Gene sequence:

>1257_bases
ATGAAAGTGCTTGTTTTAGGTGCGGGTGTTGCCGGCGTGTCTTCCGCGTGGTATCTGGCAGAGGCAGGACATGAAGTAAC
GGTCATCGACCGCGCCGAGGGTGTGGCGATGGAAACCAGTTTTGCCAACGCAGGCCAGCTTTCTTACGGCTATACCACGC
CTTGGGCTGCACCCGGTATCCCGACCAAAGCGCTGAAATGGCTGTTTAAAAGCCATCCGCCTTTGCTGTTTCGCCCCGAC
GGCAGCCTGTATCAAATCGAATGGCTGTGGCAAATGCTGCAAAACTGCACGGCAGCGCACTATCAAACCAATAAAGAGCG
CATGGTCAGGATTTCCGAATACAGCCGTGAAATGTTCCGCCGTTTTGAAGCGCAAACCGGCATGAATTTTGAGGAACGCA
AAAAAGGGACGTTGCAGATTTTCCGCCAAACCAAAGAAGTCGAAGCGGCAGAACAAGACATTGCCGTTTTGGAACGCTAC
GGCGTGCCGTACCGCCGTCTGAAACCCGAAGAATGTGCAGAATTTGAGCCTGCGCTGGCACGCGTTACCGCCAAAATTGC
CAGCGGCCTGCACCTGCCTGCAGATGCAACCGGCGACTGCCGCCTCTTCACTGAAAACCTATACAAATTGTGTCAGGAAA
AGGGCGTACGGTTTCATTTCAACCAAACCATCAGCCGCATCGACCACAACGGGCTGCGCATCAAAACCGTTGAAACCGAA
ACAGGGCGGTTTGAAGCAGATGCCGTTGTCTGCGCGCTCGGTTGTTTCAGCAGGACGGTTTTGGCGCAGTTGGATCTCAA
TCTGCCCATTTATCCCGTCAAAGGCTATTCCTTGACCCTGCCGGTCACAAATTCCGACGGCGCGCCGGTGTCCACCGTTT
TAGATGAAAGCTACAAAGTCGCCATCACGCGCTTTGACAACAGAATCCGCGTCGGCGGTATGGCGGAATTGTCGGGCTAC
GAAATCAAACTGCCCGAAAAACGCCGCGAAACCTTGGCTTTGGTCGTCAACGACTTGTTCCCGGAAGGCGGCGATTTGAG
CCAAGCATCGTTCTGGAGCGGCCTCAGGCCGATGACGCCCGACAGCACGCCGTTAATCGGTCGCACCCGCTTTGACAACC
TGTTTCTGAATACCGGCCACGGTACTTTAGGCTGGACCATGTCGCTGGGTTCGGCAAAATTAACCGCCGATATCGTGAGC
GGCAAAGACACCGAAATCCGCAGCGACGATTTGAGCCTGTCGCGTTATCAGGCTTAA

Upstream 100 bases:

>100_bases
AAACGGCGAATTGCCGCATTAATATCCGAGGCCGTCTGAATCCGAATATTCAGACGGCACGGCATATTAAGTCTGTTTTG
AAAAAGCCGGAGGGAGAAAC

Downstream 100 bases:

>100_bases
GCTGGAAAGCACTAAGGTTTAGCGGCATTTCAAATTTAAAGGCCGTCTGAAAATCATTTTTCAGACGGCCTTTTGTTTCA
AAATCCGTGTATCCAATCAA

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPD
GSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
GVPYRRLKPEECAEFEPALARVTAKIASGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETE
TGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGY
EIKLPEKRRETLALVVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVS
GKDTEIRSDDLSLSRYQA

Sequences:

>Translated_418_residues
MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPD
GSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
GVPYRRLKPEECAEFEPALARVTAKIASGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETE
TGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGY
EIKLPEKRRETLALVVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVS
GKDTEIRSDDLSLSRYQA
>Mature_418_residues
MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPD
GSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
GVPYRRLKPEECAEFEPALARVTAKIASGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETE
TGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGY
EIKLPEKRRETLALVVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVS
GKDTEIRSDDLSLSRYQA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=56.0096153846154, Blast_Score=511, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46626; Mature: 46626

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGI
CEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFR
CHHHHHHHHHCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHH
RFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERYGVPYRRLKPEECAEFEPALA
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHH
RVTAKIASGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETE
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEEEEECC
TGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKV
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCHHHHHCCCEEE
AITRFDNRIRVGGMAELSGYEIKLPEKRRETLALVVNDLFPEGGDLSQASFWSGLRPMTP
EEEEECCEEEECCEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCC
DSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVSGKDTEIRSDDLSLSRYQA
CCCCCEECEECCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGI
CEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQTNKERMVRISEYSREMFR
CHHHHHHHHHCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHH
RFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERYGVPYRRLKPEECAEFEPALA
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHH
RVTAKIASGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETE
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEEEEECC
TGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKV
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCHHHHHCCCEEE
AITRFDNRIRVGGMAELSGYEIKLPEKRRETLALVVNDLFPEGGDLSQASFWSGLRPMTP
EEEEECCEEEECCEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCC
DSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVSGKDTEIRSDDLSLSRYQA
CCCCCEECEECCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA