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The map label for this gene is yaaJ [C]

Identifier: 161870886

GI number: 161870886

Start: 2026883

End: 2028274

Strand: Direct

Name: yaaJ [C]

Synonym: NMCC_1975

Alternate gene names: 161870886

Gene position: 2026883-2028274 (Clockwise)

Preceding gene: 161870885

Following gene: 161870887

Centisome position: 94.12

GC content: 53.81

Gene sequence:

>1392_bases
ATGCAATTGTTTTTAGACAATCTCAAAGCCTTTTTTGAAACCATCAGCGGCTGGGTCTGGGGACCTGTCATGTTGGTATT
GCTGGTCGGTACGGGCATTTTGCTGACCGTTTTGCTGAAAGGCTTGCAGTTCACTATGTTGGGTTATGCACTGAAACAGG
CGTTTGTGCCGTCAAAGAAGCATGAAGACGGCGAAGACCACGAAGGCGATATTTCCCATTTCGCGGCGTTGATGACCGCG
CTGTCCGCCACTATCGGTACGGGCAACATCGCCGGTGTGGCGACTGCGGTGGTAACCGGCGGCCCGGGCGCGGTATTTTG
GATGTGGATGACCGCCATTTTCGGCATGGCCACCAAATACGGCGAGGGCGTGTTGGCGGTGAAATACCGCGTCACCAATT
CCAAAGGCGAAATGTCCGGCGGCCCGATGTATTACATCGAAAAAGGCTTGGGCAAAAACTGGAAATGGATGGCCGTTGCA
TTTGCGCTGTTCGGCACATTCGCTTCCTTCGGTATCGGCAGCTCGGTGCAGTCCAACTCGGTTGCACAGGCGGTGCAAAC
CAGCTTCGGTATCGAACCTGCCTATACCGGCATTACGTTGACCGTTCTGACTGCCGTTGTCGTTTTAGGTGGTATTAAAG
GCATCGCCAAAGCCGCTTCTTTCATCGTGCCTGCTATGGCGGTGTTTTATGTGTTGGGCGGTCTTTCCATTATCGCGATT
AATTCCGATGCACTGATGCCTGCCGTCAAGCTGATTTTCTCCGATGCGTTCAGCGCGCAGGCAGTGGCGGGCGGTGCTAT
CGGTACGGTCATCCGCTACGGCGTGGCGCGCGGCGTGTTCTCCAATGAGGCAGGTATGGGTTCTGCGCCTATTGCCGCCG
CAGCCGCGAAAACCGACCATCCCGTCCGTCAGGCCTTGGTTTCTATGACCGGTACGTTTTTGGATACCATCGTCGTTTGC
TCGATTACCGGCATCGTGTTGGTAATGGGACTGCTCGGCGCGGGCGGCGAGTTTGTCAAACCTGAAGTGAGCGGCGCGGC
ACTGACAACCGTCACATTCCAAAAAATGCTGCCCGGCATCGGCGGCTGGATTGTCACCATCGGCCTGATTTTCTTTGCCT
ACTCAACCATTTTGGGCTGGTGCTATTACGGCGAAAAATGCGCGGTGTATGTTTTCGGCGAGAAATTTGCCGGTTTGTAC
CGCGTCGGTTATGTTTCTTCCGTTATGCTAGGTACCGTGTTGAGCCTTGATTTGGTGTGGCTGGCTTCGGACACATTCAA
CGGCTTGATGGCATTGCCCAACCTGATTGCACTTTTATTGATGGCGAAAGTCATCGTCAATGAAACGCGCGACTTCAAAC
AAAAAATCACAAACGGCGAATTGCCGCATTAA

Upstream 100 bases:

>100_bases
TTTTCAAAAGAACATATTGTCTTATTGAATATTCTGTGCTGAAATTACAGGACACTACAAAAGTGGTGTTTTAAAAATAA
AACAGACAAAGGAGAAAGCC

Downstream 100 bases:

>100_bases
TATCCGAGGCCGTCTGAATCCGAATATTCAGACGGCACGGCATATTAAGTCTGTTTTGAAAAAGCCGGAGGGAGAAACAT
GAAAGTGCTTGTTTTAGGTG

Product: sodium/alanine symporter, putative

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MQLFLDNLKAFFETISGWVWGPVMLVLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKKHEDGEDHEGDISHFAALMTA
LSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKYGEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVA
FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKAASFIVPAMAVFYVLGGLSIIAI
NSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVC
SITGIVLVMGLLGAGGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLY
RVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKITNGELPH

Sequences:

>Translated_463_residues
MQLFLDNLKAFFETISGWVWGPVMLVLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKKHEDGEDHEGDISHFAALMTA
LSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKYGEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVA
FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKAASFIVPAMAVFYVLGGLSIIAI
NSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVC
SITGIVLVMGLLGAGGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLY
RVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKITNGELPH
>Mature_463_residues
MQLFLDNLKAFFETISGWVWGPVMLVLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKKHEDGEDHEGDISHFAALMTA
LSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKYGEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVA
FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKAASFIVPAMAVFYVLGGLSIIAI
NSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVC
SITGIVLVMGLLGAGGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLY
RVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKITNGELPH

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=466, Percent_Identity=36.2660944206009, Blast_Score=239, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48619; Mature: 48619

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFLDNLKAFFETISGWVWGPVMLVLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKK
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HEDGEDHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKY
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH
GEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVAFALFGTFASFGIGSSVQSNS
CCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKAASFIVPAMAVFYVLGGLSIIAI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDH
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCH
PVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGAGGEFVKPEVSGAALTTVTFQKMLPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLYRVGYVSSVMLGTVLSLDLVW
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKITNGELPH
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQLFLDNLKAFFETISGWVWGPVMLVLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKK
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HEDGEDHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKY
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH
GEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVAFALFGTFASFGIGSSVQSNS
CCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKAASFIVPAMAVFYVLGGLSIIAI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDH
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCH
PVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGAGGEFVKPEVSGAALTTVTFQKMLPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLYRVGYVSSVMLGTVLSLDLVW
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKITNGELPH
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]