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The map label for this gene is ompH

Identifier: 161870882

GI number: 161870882

Start: 2023601

End: 2024101

Strand: Direct

Name: ompH

Synonym: NMCC_1971

Alternate gene names: NA

Gene position: 2023601-2024101 (Clockwise)

Preceding gene: 161870881

Following gene: 161870883

Centisome position: 93.97

GC content: 52.89

Gene sequence:

>501_bases
ATGACCCGTTTGACCCGCGCGTTTGCCGCGGCTCTGATCGGTTTGTGCTGCACCGCAGGCGCGCACGCCGACACCTTCCA
AAAAATCGGCTTTATCAACACCGAGCGCATCTACCTCGAATCCAAGCAGGCGCGCAAGATTCAAAAAACGCTGGACAGCG
AATTTTCCGCTCGTCAGGACGAATTGCAAAAACTGCAACGCGAAGGTCTGGATTTGGAAAGGCAGCTTGCCGAAGGCAAA
CTCAGAAACGCAAAAAAGGCGCAAGCCGAAGAAAAATGGCGCGGGCTGGTCGCAGCGTTCCGCAAAAAACAGGCGCAGTT
TGAAGAAGACTACAACCTCCGCCGCAACGAAGAGTTTGCCTCCCTCCAGCAAAACGCCAACCGCGTCATCGTCAAAATCG
CCAAACAGGAAGGTTACGATGTCATTTTGCAGAACGTGATTTACGTCAACACCCAATACGACGTTACCGACAGCGTCATT
AAAGAAATGAACGCCCGCTGA

Upstream 100 bases:

>100_bases
AACGCTTCCAATTCCAACTCGGCACGACGTTCTAATCCCGCAAATGCCGTCTGAAGCCCTTCAGACGGCATTTCGCGGCA
ACATTCGAAGGAGTTTTACC

Downstream 100 bases:

>100_bases
CCCTTTCAGACGGCATATCGAACAGGAAAACCATGATTCCGGCCACCTACACCCTGTCCCAAATCACCGCACAGCTCGGC
GGCGAATGGCGCGGCGAGGA

Product: outer membrane protein OmpH, putative

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein OmpH; Transmembrane Protein; Outer Membrane Protein OmpH Family; Outer Membrane Protein OmpH Family Protein; OmpH/HlpA Family Outer Membrane Protein; Outer Membrane Chaperone OmpH; Chaperone For Outer Membrane Protein; Periplasmic Molecular Chaperone For Outer Membrane Proteins

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGK
LRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
KEMNAR

Sequences:

>Translated_166_residues
MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGK
LRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
KEMNAR
>Mature_165_residues
TRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKL
RNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVIK
EMNAR

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19131; Mature: 19000

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQD
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
ELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVIKEMNAR
HHHHCCCCEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQD
CHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
ELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVIKEMNAR
HHHHCCCCEEEHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA