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The map label for this gene is sopA [C]

Identifier: 161870872

GI number: 161870872

Start: 2012519

End: 2013292

Strand: Reverse

Name: sopA [C]

Synonym: NMCC_1960

Alternate gene names: 161870872

Gene position: 2013292-2012519 (Counterclockwise)

Preceding gene: 161870873

Following gene: 161870867

Centisome position: 93.49

GC content: 58.66

Gene sequence:

>774_bases
ATGAGTGCGAACATCCTTGCCATCGCCAATCAGAAGGGCGGTGTGGGCAAAACGACGACGACGGTAAATTTGGCGGCTTC
GCTGGCATCGCGCGGCAAACGCGTGCTGGTGGTCGATTTGGATCCGCAGGGCAATGCGACAACGGGCAGCGGCATCGACA
AGGCAAGTTTGCAGTCCGGCGTTTATCAGGTCGTACTGGGCGATGCGGACGTGAAATCGGCGACGGTACGCAGCAAAGAG
GGCGGATACGCTGTGTTGGGCGCGAACCGCGCGCTGGCCGGTGCGGAAATCGAGCTGGTGCAGGAAATCGCCCGGGAAGT
GCGTTTGAAAAACGCGCTCAAGGCAGTGGCGGAAGATTACGACTTTATCCTGATCGACTGTCCGCCTTCGCTGACGCTGT
TGACGCTTAACGGCTTGGTGGCGGCGGGCGGCGTGATTGTGCCGATGTTGTGCGAATATTACGCGCTGGAAGGGATTTCC
GATTTGATTGCGACCGTGCGCAAAATCCGTCAGGCGGTCAATCCCGATTTGGACATCACGGGCATCGTGCGCACGATGTA
CGACAGCCGCAGCAGGCTGGTTGCCGAAGTCAGCGAACAGTTGCGCAGCCATTTCGGGGATTTGCTTTTTGAAACCGTCA
TCCCGCGCAATATCCGCCTTGCGGAAGCACCAAGCCACGGTATGCCGGTTATGGCTTATGATGCGCAGGCAAAGGGTACC
AAGGCGTATCTTGCCTTGGCGGACGAGCTGATGGCGAGGGTGTCGGGGAAATAG

Upstream 100 bases:

>100_bases
GAGCGCGCTTCAGACGGCATGAATACCTTTTTTGTGCGGATAAAGGTAAAATTCCGCACTGTTTTTCTTTTTTCAACATC
AGACGGGACACGGGCGGGAC

Downstream 100 bases:

>100_bases
GTCAATCCAAATCAGGCTGCCCGTGCCTTTATGCCGTTTGACCGAGTGCGTTAATATGGTGGATTAAAATAAAAATACTT
ATATCGTCATTTATAGTGGA

Product: chromosome partitioning protein, ParA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSGVYQVVLGDADVKSATVRSKE
GGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGT
KAYLALADELMARVSGK

Sequences:

>Translated_257_residues
MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSGVYQVVLGDADVKSATVRSKE
GGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGT
KAYLALADELMARVSGK
>Mature_256_residues
SANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSGVYQVVLGDADVKSATVRSKEG
GYAVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISD
LIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGTK
AYLALADELMARVSGK

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27199; Mature: 27067

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSG
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHCC
VYQVVLGDADVKSATVRSKEGGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDY
CEEEEECCCCCCHHEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDIT
CEEEEECCCCEEEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH
GIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCC
KAYLALADELMARVSGK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSG
CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHCC
VYQVVLGDADVKSATVRSKEGGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDY
CEEEEECCCCCCHHEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDIT
CEEEEECCCCEEEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH
GIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCC
KAYLALADELMARVSGK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]