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The map label for this gene is 161870817

Identifier: 161870817

GI number: 161870817

Start: 1948755

End: 1949066

Strand: Reverse

Name: 161870817

Synonym: NMCC_1899

Alternate gene names: NA

Gene position: 1949066-1948755 (Counterclockwise)

Preceding gene: 161870818

Following gene: 161870816

Centisome position: 90.51

GC content: 40.06

Gene sequence:

>312_bases
ATGCAAAACCATCCGTTTGCTAGTCAACCTGCCGTATATATTTTGGCAAACGGTAAAAACGGAACACTCTATATCGGCGT
TACCATGAATTTGCCGGAAAGAGTTTGGCAGCACAAAAACCATGTCAATATTGATGGCTTTACTGCCCGATATGATGTGC
ATGATTTGGTTTGGTATGAGTTTTTTGAGAATATGCCTGAAGCAGTTGCCAAAGAAAAAACGATGAAAAAATGGCGACGT
GAATGGAAGATTAAATTGATTGAAGAACAAAATCCCGAATGGTTGGACTTGTCGGGCGTGTTGTTTGTTTAG

Upstream 100 bases:

>100_bases
CGCTTACGCGGGAATGACGGCGGGAGTGGGCAGATGTTTTCAGATGAAAACGGCTGTAAATGATATTGAAAAAAGTTGTT
TATATTGCAGGAAACATTAA

Downstream 100 bases:

>100_bases
TTTTATTTCTGGAACTTTAAAAACTGTCGTTATTCCAGCCCCACCTACGCGCAGACAGGCTACGGCGGGAATCACCGCAA
AAGTTAAGAAACCAATGTTT

Product: putative endonuclease

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQNHPFASQPAVYILANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYEFFENMPEAVAKEKTMKKWRR
EWKIKLIEEQNPEWLDLSGVLFV

Sequences:

>Translated_103_residues
MQNHPFASQPAVYILANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYEFFENMPEAVAKEKTMKKWRR
EWKIKLIEEQNPEWLDLSGVLFV
>Mature_103_residues
MQNHPFASQPAVYILANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYEFFENMPEAVAKEKTMKKWRR
EWKIKLIEEQNPEWLDLSGVLFV

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12248; Mature: 12248

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNHPFASQPAVYILANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYE
CCCCCCCCCCEEEEEEECCCCEEEEEEEECCHHHHHCCCCCCCCCCEEEECCHHHHHHHH
FFENMPEAVAKEKTMKKWRREWKIKLIEEQNPEWLDLSGVLFV
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCEEEC
>Mature Secondary Structure
MQNHPFASQPAVYILANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYE
CCCCCCCCCCEEEEEEECCCCEEEEEEEECCHHHHHCCCCCCCCCCEEEECCHHHHHHHH
FFENMPEAVAKEKTMKKWRREWKIKLIEEQNPEWLDLSGVLFV
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA