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The map label for this gene is yciM [H]

Identifier: 161870730

GI number: 161870730

Start: 1849434

End: 1850642

Strand: Reverse

Name: yciM [H]

Synonym: NMCC_1803

Alternate gene names: 161870730

Gene position: 1850642-1849434 (Counterclockwise)

Preceding gene: 161870731

Following gene: 161870729

Centisome position: 85.94

GC content: 53.27

Gene sequence:

>1209_bases
ATGCGCCCGAATCTACCAAACAGCCTTAAGAAAGCCGATATGGACAACGAATTGTGGATTATCCTGCTGCCGATTATCCT
TTTGCCCGTCTTCTTCGCGATGGGCTGGTTTGCCGCCCGCGTGGATATGAAAACCGTATTGAAGCAGGCAAAAAGCATCC
CTTCGGGATTTTATAAAAGCTTGGACGCTTTGGTCGACCGCAACAGCGGGCGCGCGGCAAGGGAGTTGGCGGAAGTCGTC
GACGGCCGGCCGCAATCGTATGATTTGAACCTCACCCTCGGCAAACTTTACCGCCAGCGTGGCGAAAACGACAAAGCCAT
CAACATACACCGGACAATGCTCGATTCTCCCGATACGGTCGGCGAAAAGCGCGCGCGCGTCCTGTTTGAATTGGCGCAAA
ACTACCAAAGTGCGGGGTTGGTCGATCGTGCCGAACAGATTTTTTTGGGGCTGCAAGACGGTAAAATGGCGCGTGAAGCC
AGACAGCACCTGCTCAATATCTACCAACAGGACAGGGATTGGGAAAAAGCGGTTGAAACCGCCCGGCTGCTCAGCCATGA
CGATCAGACCTATCAGTTTGAAATCGCCCAGTTTTATTGCGAACTTGCCCAAGCCGCGCTGTTCAAGTCCAATTTCGATG
TCGCGCGTTTCAATGTCGGCAAGGCACTCGAAGCCAACAAAAAATGCACCCGCGCCAACATGATTTTGGGCGACATCGAA
CACCGACAAGGCAATTTCCCTGCCGCCGTCGAAGCCTATGCCGCCATCGAGCAGCAAAACCATGCATACTTGAGCATGGT
CGGCGAGAAGCTTTACGAAGCCTATGCCGCGCAGGGAAAACCTGAAGAAGGCTTGAACCGTCTGACAGGATATATGCAGA
CGTTTCCCGAACTTGACCTGATCAATGTCGTGTACGAGAAATCCCTGCTGCTTAAGTGCGAGAAAGAAGCCGCGCAAACC
GCCGTCGAGCTTGTCCGCCGCAAGCCCGACCTCAACGGCGTGTACCGCCTGCTTGGTTTGAAACTCAGCGATTTGGATCC
GGCTTGGAAAGCCGATGCCGATATGATGCGTTCGGTTATCGGACGGCAGCTACAGCGCAGCGTGATGTACCGGTGCCGAA
ACTGCCACTTCAAATCACAAGTCTTTTTCTGGCATTGTCCTGCCTGCAACAAATGGCAGACGTTTACGCCAAACAAAATC
GAAGTTTAA

Upstream 100 bases:

>100_bases
CGGTTGTTGTCGTTACGTGGCGAGAACGGCAGGTTGCGTGCCGAAGTAAAGAAAAATGCGCGTTTGACGGGGAAGGAGCT
GACCGCACCACCGGCGCAAA

Downstream 100 bases:

>100_bases
CCACTACCGAGAGGAACACAAAAATGCGCTTACTCCATACTATGCTCCGCGTGGGCAATCTCGAAAAATCCCTCGATTTC
TACCAAAACGTTTTGGGTAT

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKSLDALVDRNSGRAARELAEVV
DGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREA
RQHLLNIYQQDRDWEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDLINVVYEKSLLLKCEKEAAQT
AVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKI
EV

Sequences:

>Translated_402_residues
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKSLDALVDRNSGRAARELAEVV
DGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREA
RQHLLNIYQQDRDWEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDLINVVYEKSLLLKCEKEAAQT
AVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKI
EV
>Mature_402_residues
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKSLDALVDRNSGRAARELAEVV
DGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREA
RQHLLNIYQQDRDWEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDLINVVYEKSLLLKCEKEAAQT
AVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKI
EV

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=378, Percent_Identity=28.8359788359788, Blast_Score=166, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46026; Mature: 46026

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKS
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTV
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHCCCCCHH
GEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRDWEKAVET
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHHHH
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
INVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKS
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTV
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHCCCCCHH
GEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRDWEKAVET
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHHHH
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
INVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]