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The map label for this gene is insH1 [C]

Identifier: 161870400

GI number: 161870400

Start: 1469566

End: 1470024

Strand: Direct

Name: insH1 [C]

Synonym: NMCC_1447

Alternate gene names: 161870400

Gene position: 1469566-1470024 (Clockwise)

Preceding gene: 161870399

Following gene: 161870401

Centisome position: 68.24

GC content: 53.16

Gene sequence:

>459_bases
ATGATTGCCAAACACATCGACCGCTTCCCGCTATTGAAGTTGGACCGGGTGATTGATTGGCAGCCGATCGAGCAGTACCT
GAACCGTCAAAAAACCCGTTACCTTAGAGACCACCGCGGCCGTCCCGCCTACCCGCTGTTGTCCATGTTCAAAGCCGTCC
TGCTCGGACAATGGCACAGCCTCTCCGATCCCGAACTCGAACACAGCCTCATCACCCGCATCGATTTCAACCTGTTTTGC
CGTTTTGACGAACTGAGCATCCCTGATTACAGCACCTTATGCCGCTACCGCAATTGGCTGGCGCAAGACGACACCCTGTC
CGAATTGCTCAAACTGATCAACCGCCAACTGACCGAAAAAGGTTTAAAAATAGAGAAAGCATCCGCTGCCGTCGTTGACG
CCACCATTATTCAGACCGCCGGCAGCAAACAGCGTCAGGCCATAGAAGTTGACGAATAA

Upstream 100 bases:

>100_bases
CCCACACTCCTATCCCGAGACCTTTGCAAAATCCCCCAAAATCCCCTAAATTCCCACCAAGACATTTAGGAGCACCTTCT
TCCAACAAACCGCCCAAGCC

Downstream 100 bases:

>100_bases
GGACAAATCAACGGCCAAACCACACCGAGTAAGGACAGCGATGCCCGTTGGATCAAGAAAAACGGCCTCTACAAACTCGG
TTACAAACAACATACCCGTA

Product: IS1106A3 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDE

Sequences:

>Translated_152_residues
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDE
>Mature_152_residues
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDE

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789921, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789612, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789355, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788518, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788342, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787592, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786877, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786764, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786453, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787634, Length=142, Percent_Identity=28.8732394366197, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 17839; Mature: 17839

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHS
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEK
CCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GLKIEKASAAVVDATIIQTAGSKQRQAIEVDE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHS
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEK
CCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GLKIEKASAAVVDATIIQTAGSKQRQAIEVDE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]