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The map label for this gene is 161870401

Identifier: 161870401

GI number: 161870401

Start: 1470199

End: 1470540

Strand: Direct

Name: 161870401

Synonym: NMCC_1448

Alternate gene names: NA

Gene position: 1470199-1470540 (Clockwise)

Preceding gene: 161870400

Following gene: 161870402

Centisome position: 68.27

GC content: 53.8

Gene sequence:

>342_bases
TTGTTGGAAGGACTGCCCAAAGGTACGACCGTCTATGCCGACAAAGGCTATGACAGTGCGGAAAACCGGCAACATCTGAA
AGAACATCAGTTACCGGACGGCATTATGCGCAAAGCCTGCCGCAACCGTCCGCTGACGGAAACGCAAACCAAACGCAACC
GGTATTTGTCGAAGACCCGTTATGTGGTCGAACAGAGCTTCGGTACGCTGCACCGTAAATTCCGCTATGCGCGGGCAGCC
TATTTCGGACTGATTAAAGTGAGTGCGCAAAGCCACCTGAAGGCGATGTGTTTGAACCTGTTGAAAGCGGCCAACAGGCT
AAGTGCGCCCGCTGCCGTCTAA

Upstream 100 bases:

>100_bases
ACTCGGTTACAAACAACATACCCGTACCGATGCGGAAGGCTATATCGAGAAACTGCACATTACTCCCGCCAATGCCCATG
AGTGCAAACACCTGTCGCCG

Downstream 100 bases:

>100_bases
AAGGCAGCCTGGATGCCTGATTATCAGGTATCCGGGCAGGATTAAGGGGGTATTTGGGTAGAATTAGGGAGTGATTGGTA
GCGAAAACAGCTGAAAACCT

Product: IS1106A3 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLEGLPKGTTVYADKGYDSAENRQHLKEHQLPDGIMRKACRNRPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAA
YFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAV

Sequences:

>Translated_113_residues
MLEGLPKGTTVYADKGYDSAENRQHLKEHQLPDGIMRKACRNRPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAA
YFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAV
>Mature_113_residues
MLEGLPKGTTVYADKGYDSAENRQHLKEHQLPDGIMRKACRNRPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAA
YFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 12867; Mature: 12867

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGLPKGTTVYADKGYDSAENRQHLKEHQLPDGIMRKACRNRPLTETQTKRNRYLSKTR
CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLEGLPKGTTVYADKGYDSAENRQHLKEHQLPDGIMRKACRNRPLTETQTKRNRYLSKTR
CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]