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The map label for this gene is scpA [H]

Identifier: 161870365

GI number: 161870365

Start: 1432113

End: 1432967

Strand: Direct

Name: scpA [H]

Synonym: NMCC_1409

Alternate gene names: 161870365

Gene position: 1432113-1432967 (Clockwise)

Preceding gene: 161870364

Following gene: 161870366

Centisome position: 66.5

GC content: 54.74

Gene sequence:

>855_bases
ATGCCGCCCATCCCTGCCCCATCTGCACCATCCGAGCACACCGTCGCATGGGTATTCGGTCAACCCGTTACCGATTTGCC
GCAGGATTTGTTTATCCCGCCCGACGCGCTGAAAGTCGTATTGGGCAGTTTTCAAGGCCCTTTGGATCTACTGCTGTATC
TGATCCGCAAGCAGAACATCGATGTTCTCGATATTCCGATGGTGAAGATTACCGAGCAGTATCTGCACTACATCGCCCAA
ATAGAAGCCTATCAGTTTGATTTGGCGGCGGAATATCTTTTGATGGCAGCAATGCTGATTGAAATCAAATCGCGCCTGCT
GCTGCCGCGTACCGAAGCCGTCGAAGACGAAGAAGCCGACCCGCGTGCCGAGTTGGTGCGCCGCCTGTTGGCTTATGAAC
AGATGAAGCTGGCGGCACAAGGGTTGGATGCGCTTCCTCGTGCGGGCCGGGATTTCGCATGGGCGTACCTACCTCTGGAA
ATTGCCGTCGAAGCCAAGCTGCCCGAAGTCTATATTACCGACTTGACGCAAGCGTGGCTGGGTATTTTGTCTCGGGCAAA
ACATACGCGCAGCCACGAAGTTATCAAAGAAACCATCTCCGTGCGCGCGCAAATGACGGCAATCCTGCGCCGTTTGAACG
GACACGGGATATGCAGGTTTCACGACCTGTTCAATCCCGAACAGGGCGCGGCTTACGTGGTCGTCAACTTCATCTCACTG
TTGGAGCTTGCCAAAGAAGGATTGGTCAGAATCGTGCAGGAAGTCGGTTTCGGAGAAATCCGAATCAGCCTCAATCATGA
GGGGGCGCATTCAGACGGCATTTCCGGCACACGGGGCGGGCGCGATGTGTTCTAA

Upstream 100 bases:

>100_bases
TAATGCCGTCTGAACATCTGCCCGACCACATTATACGTGAATGTCGGCAGATTGTTTTCTTTTGTAAACTTATATTAAAA
TCCACTTACCGATTCACGCC

Downstream 100 bases:

>100_bases
TACGCCCCAAGCCGCCACCAAAAATCGGGAGACACGCCATATGACCGGCATCATACATTCGCTGCTTGACACCGACCTCT
ACAAATTCACTATGCTGCAA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQ
IEAYQFDLAAEYLLMAAMLIEIKSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPEQGAAYVVVNFISL
LELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISGTRGGRDVF

Sequences:

>Translated_284_residues
MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQ
IEAYQFDLAAEYLLMAAMLIEIKSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPEQGAAYVVVNFISL
LELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISGTRGGRDVF
>Mature_283_residues
PPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQI
EAYQFDLAAEYLLMAAMLIEIKSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEI
AVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPEQGAAYVVVNFISLL
ELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISGTRGGRDVF

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31767; Mature: 31636

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSFQGPLDLLLYLIRKQNI
CCCCCCCCCCCCCEEEEEECCCHHHCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
DVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEIKSRLLLPRTEAVEDEEAD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEIAVEAKLPEVYITDLTQAWL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
GILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPEQGAAYVVVNFISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHH
LELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISGTRGGRDVF
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSFQGPLDLLLYLIRKQNI
CCCCCCCCCCCCEEEEEECCCHHHCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
DVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEIKSRLLLPRTEAVEDEEAD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEIAVEAKLPEVYITDLTQAWL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
GILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGICRFHDLFNPEQGAAYVVVNFISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHH
LELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISGTRGGRDVF
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]