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The map label for this gene is opa95 [H]

Identifier: 161870334

GI number: 161870334

Start: 1397505

End: 1398206

Strand: Reverse

Name: opa95 [H]

Synonym: NMCC_1378

Alternate gene names: 161870334

Gene position: 1398206-1397505 (Counterclockwise)

Preceding gene: 161870337

Following gene: 161870333

Centisome position: 64.93

GC content: 49.57

Gene sequence:

>702_bases
GTGCAGGCGGATTTAGCTTACGCCGCCGAACGCATTACCCACAATTATCCGGAACCAACCGGTGCAGACAAAGACAAAAT
AAGCACAGTAAGCGATTATTTCAGAAACATCCGTGCGCATTCCATCCACCCCCGGGTGTCGGTCGGCTACGATTTCGGCG
GCTGGAGGATAGCGGCAGATTATGCCAGTTACAGAAAATGGAACAACAATAAATATTCCGTCAACACAAAAGAGGTATCA
AGAAACAATAGCAATGGCAATGACACCTGGCAAGAACTGAAGACGGAAAATCAGGAAAACGGCAGCTTCCACGCCGTTTC
TTCTCTCGGCTTATCCGCCATTTACGATTTCAAACTCAACGATAAATTCGATAAATTCAAACCCTATATCGGCGCGCGCG
TCGCCTACGGACACGTTAAACATCAGGTTCATTCGGTGAGAAAAGAAACCACGACTGTTTTCAGTAAACCAAGTGGTAGC
GCTACAAAGCCAGGCCAGATCCCAAGTTTGGTTACCAAACCTGCCTATCACGAAAGCCACAGCATCAGCAGCTTGGGTCT
TGGTGTCATCGCCGGTGTCGGTTTCGACATCACGCCCAAGCTGACCTTGGATACCGGATACCGCTACCACAACTGGGGAC
GCTTGGAAAACACCCGATTCAAAACCCACGAAGTCTCATTGGGCGTGCGCTACCGCTTCTGA

Upstream 100 bases:

>100_bases
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCGCAGCGCAGGCGGCAAGTGAAGACG
GCAGCCGCAGCCCGTATTAT

Downstream 100 bases:

>100_bases
TTCCCCGATACCGATGCCGTCTGAACCTTCAGACGGCATTTTTGATGCACCTGCCGTTGACAAGCGCAGGACGGGCGTGG
AAATACCCAAACCGTCATTC

Product: opacity protein Opa95

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQADLAYAAERITHNYPEPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKEVS
RNNSNGNDTWQELKTENQENGSFHAVSSLGLSAIYDFKLNDKFDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGS
ATKPGQIPSLVTKPAYHESHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF

Sequences:

>Translated_233_residues
MQADLAYAAERITHNYPEPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKEVS
RNNSNGNDTWQELKTENQENGSFHAVSSLGLSAIYDFKLNDKFDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGS
ATKPGQIPSLVTKPAYHESHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
>Mature_233_residues
MQADLAYAAERITHNYPEPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKEVS
RNNSNGNDTWQELKTENQENGSFHAVSSLGLSAIYDFKLNDKFDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGS
ATKPGQIPSLVTKPAYHESHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR016373
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 26309; Mature: 26309

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADLAYAAERITHNYPEPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAAD
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEC
YASYRKWNNNKYSVNTKEVSRNNSNGNDTWQELKTENQENGSFHAVSSLGLSAIYDFKLN
HHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEHHHCCCEEEEEEECC
DKFDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESH
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHCCCCCCCCC
SISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
CCHHHCHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MQADLAYAAERITHNYPEPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAAD
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEC
YASYRKWNNNKYSVNTKEVSRNNSNGNDTWQELKTENQENGSFHAVSSLGLSAIYDFKLN
HHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEHHHCCCEEEEEEECC
DKFDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESH
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHCCCCCCCCC
SISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
CCHHHCHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2455211 [H]