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The map label for this gene is yajR [H]

Identifier: 161870330

GI number: 161870330

Start: 1392891

End: 1394276

Strand: Reverse

Name: yajR [H]

Synonym: NMCC_1374

Alternate gene names: 161870330

Gene position: 1394276-1392891 (Counterclockwise)

Preceding gene: 161870331

Following gene: 161870329

Centisome position: 64.75

GC content: 57.29

Gene sequence:

>1386_bases
ATGATGGCAAGAGATAACCGCATCCAAATGTTTCCGCACGAATGGCGCGCCAGTACGACGCTTTCCGGCGTGTACGCGCT
GCGTATGCTGGGTATGTTCCTCGTGCTGCCCGTATTGGCGGTGTATGCCGCCTCGCTGCCCGGCGCGGAAGGCAACAAAA
CGCTGGTCGGGCTGGCAATGGGCATTTACGGGCTGACACAGGCTCTGCTGCAACTGCCTTTGGGCATCGCTTCCGACAAG
TTCGGGCGCAAGAAAACCATTTATGTCGGGCTGATTGTGTTTGCAGCGGGCAGCTTCCTTGCCGCCGCCGCCGATACGCT
GCCCATGCTGGTCGCCGCACGCGCCATACAGGGTGCGGGAGCGGTCAGTGCGGCGGTTACCGCGCTGCTGGCGGATTTGA
CGCGCGACGGCGTACGTACCCGCGCGATGGCGATGATCGGTTTGAGTATCGGTTTGACTTTTTCGGTCAGCCTTGTCGTT
GCCCCTGTGATTGCCGACGCGGTCGGCGTGCGCGGCTTGTTCCTGCTGACCGGTATGTTAACCGTCGCCAGTATCGGCGT
GGTGGCGTTTATGACTCCCGATCCCGAAGTTTCCAAGCTGCACGAAGACACGCAGGCGCAGCCTTCGCGCATAGGCGAAG
TTTTGAAAAACCGTAGGCTGCTGACGCTCGATTTCGGCATTTTCGCCCTGCACGCCGCGCAAATGGCATTGTTTACCGCG
CTGCCTTTCGCGATGACCCAGCTCGGTTTGGAAAAAATCCAGCATTGGAAAGTCTATCTGCCCTCGACCATTACGGGCTT
GGTGGTGATGGTTCCGCTGATTATCGTCGGCGAGACGCGCAACAAGCTCAAACAGGTTTTTATCTTGGGCATCGCCTGCA
TCGCGGCGGCACAGCTCGGTTTGCTGTCCGGTATGCGCTCGGTAGGCTTGATTACCGCTTATTTGGTTGTTTACTTTATC
GGTTTTAATGTGTTGGAAGCGAGCCTGCCGTCTATGGTTTCCAAAATCGCGCCGTCCGACCTGAAGGGTACGGCGATGGG
CGTGTACAACACGATGCAGTCGCTCGGACTGTTTGCCGGCGGCGTGGCAGGCGGTTTGCTGTTTCAAAAATACGGCTTTT
CCGGCGTGTTTGCCTTTTGCAGCATATTGATGCTGCTGTGGCTGGTGATTGCCGTTTTATCGCCTGCGCCCAAGCCCGTC
AAAAACCTCAGTTACCCTGTCGGCGGCGTGTGGCAGGTCAATCAGGAAGGGTTATACCGCGCCTTGTCGGAGCTTGAGGG
CGTGGAAGACATCGGTTTCAGTTTCGACGGGCAGACCGTCTATCTCAAAGTGTTGCAGAAGGGTTTCGATCAGGCTGCCG
CTGAAAAAATCATCACAGGAGTTTAA

Upstream 100 bases:

>100_bases
CCCGCGCCGCAACCGAAATACGGCGAATCCTGTATAATCCGAAAATCTGTTCACTGGAAGTTCAGACGGCATTGCAACTG
TTGATGCCGTCTGAAAAAAT

Downstream 100 bases:

>100_bases
AAAATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGC
GGTGTGTAATTTCAGCGTCG

Product: drug resistance translocase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MMARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAASLPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDK
FGRKKTIYVGLIVFAAGSFLAAAADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVV
APVIADAVGVRGLFLLTGMLTVASIGVVAFMTPDPEVSKLHEDTQAQPSRIGEVLKNRRLLTLDFGIFALHAAQMALFTA
LPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVGETRNKLKQVFILGIACIAAAQLGLLSGMRSVGLITAYLVVYFI
GFNVLEASLPSMVSKIAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVLSPAPKPV
KNLSYPVGGVWQVNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQAAAEKIITGV

Sequences:

>Translated_461_residues
MMARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAASLPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDK
FGRKKTIYVGLIVFAAGSFLAAAADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVV
APVIADAVGVRGLFLLTGMLTVASIGVVAFMTPDPEVSKLHEDTQAQPSRIGEVLKNRRLLTLDFGIFALHAAQMALFTA
LPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVGETRNKLKQVFILGIACIAAAQLGLLSGMRSVGLITAYLVVYFI
GFNVLEASLPSMVSKIAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVLSPAPKPV
KNLSYPVGGVWQVNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQAAAEKIITGV
>Mature_461_residues
MMARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAASLPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDK
FGRKKTIYVGLIVFAAGSFLAAAADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVV
APVIADAVGVRGLFLLTGMLTVASIGVVAFMTPDPEVSKLHEDTQAQPSRIGEVLKNRRLLTLDFGIFALHAAQMALFTA
LPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVGETRNKLKQVFILGIACIAAAQLGLLSGMRSVGLITAYLVVYFI
GFNVLEASLPSMVSKIAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVLSPAPKPV
KNLSYPVGGVWQVNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQAAAEKIITGV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=453, Percent_Identity=39.0728476821192, Blast_Score=317, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48840; Mature: 48840

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]