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The map label for this gene is insH1 [C]

Identifier: 161870292

GI number: 161870292

Start: 1343062

End: 1344069

Strand: Direct

Name: insH1 [C]

Synonym: NMCC_1334

Alternate gene names: 161870292

Gene position: 1343062-1344069 (Clockwise)

Preceding gene: 161870291

Following gene: 161870295

Centisome position: 62.37

GC content: 53.67

Gene sequence:

>1008_bases
ATGAGCACCTTCTTCCAGCAAACCGCCCAAGCCATGATTGCCAAACACATCGACCGTTTCCCGCTATTGAAGTTGGACCA
GGTGATTGATTGGCAGCCGATCGAGCAGTACCTGAACCGTCAAAAAACCCGTTACCTCCGAGACCACCGCGGTCGTCCCG
CCTGTCCCCTGTTGTCCATGTTCAAAGCCGTCCTGCTCGGACAATGGCACAGTCTCTCCGATCCCGAACTCGAACACAGC
CTCATCACCCGCATCGATTTCAACCTGTTTTGCCGTTTTGACGAACTAAGCATCCCCGATTACAGCACCTTATGCCGCTA
CCGCAATTGGCTGGCGCAAGACGACACCCTGTCCGAACTGTTGGAACTGATTAACTGCCAACTGACCGAAAAAGGCTTAA
AAGTAGAGAAAGCATCCGCCGCCGTCATTGACGCCACCATTATTCAGACCGCCGGCAGCAAACAGCGTCAGGCCATAGAA
GTTGACGAAGAAGGACAAGTCAGCGGCCAAACCACACCGAGTAAGGACAGCGATGCCCGTTGGATCAAGAAAAACGGCCT
CTACAAACTCGGTTACAAACAACATACACGTACCGATGCAGAAGGCTATATCGAGAAACTGCACATTACCCCCGCCAATG
CCCATGAGTGCAACCACCTGTCGCCTTTGCTGGAAGGGATAGCCGAAGGTACGACCGTCTATGCCGACAAAGGCTATGAC
AGTGCGGAAAACCGGCAACATCTGGAAGAACATCAGTTGCTGGACGGCATTATGCGCAAAGCCTGCCGCAACCGTCCGCT
GTCGGAAGCGCAAACCAAACGCAACCGATATTTGTCGAAGCCCCGTTATGTGGTCGAACAAAGCTTCGGTACGCTGCACC
GTAAATTCCGCTACGCTCGGGCAGCCTATTTCGGACTGATTAAAGTGAGTGCGCAAAGCCACCTGAAGGCGATGTGTTTG
AACCTGTTGAAAGCGGCCAACAGGCTAAGTGCGCCCGCTGCCGCCTAA

Upstream 100 bases:

>100_bases
AAAAGGAAGTGACTTAACGGCGGAAGAGAAAGAGACTGAGACCTTTGCAAAATTCCCCAAAATCCCCTAAATTCCCACCA
AGACATTTAGGAGATTTCTC

Downstream 100 bases:

>100_bases
AAGGCAGCCTGGATGCCTGATTATCGGGTATCCGGGGAGGATTAAGGGGGTATTTGGGTAAAATTAGGCGGTATTTGGGG
CGAAAACAGCCGAAAACCTG

Product: IS1106 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIE
VDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIAEGTTVYADKGYD
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSAPAAA

Sequences:

>Translated_335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIE
VDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIAEGTTVYADKGYD
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSAPAAA
>Mature_334_residues
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHSL
ITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEV
DEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIAEGTTVYADKGYDS
AENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLN
LLKAANRLSAPAAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789921, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789612, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789355, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788518, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788342, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787592, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786877, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786764, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786453, Length=313, Percent_Identity=27.7955271565495, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787634, Length=313, Percent_Identity=27.1565495207668, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 38290; Mature: 38159

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSM
CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHHCCCCCCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCEECCCCCCCCCCCCCCCCCCCCH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIAEGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSM
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHHCCCCCCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCEECCCCCCCCCCCCCCCCCCCCH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIAEGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]