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The map label for this gene is panD [H]

Identifier: 161870156

GI number: 161870156

Start: 1187883

End: 1188401

Strand: Direct

Name: panD [H]

Synonym: NMCC_1195

Alternate gene names: 161870156

Gene position: 1187883-1188401 (Clockwise)

Preceding gene: 161870155

Following gene: 161870157

Centisome position: 55.16

GC content: 51.06

Gene sequence:

>519_bases
ATGCCGTCTGAAACACCGTTTTCCTTGTCCGAAAGCCGCCATTATGAATTTGAAGGAAACTCCACTATAATACGGCATTC
AGATTTCCAGACGGCATCGCGCCCGTCAGACCGCACACAAACCAAAAGGAAATACATGTTCCGTACTATGCTTGGCGGAA
AAATCCACCGCGCCACCGTTACCGAAGCCGATTTGAACTACGTCGGCAGCATTACCGTCGATCAAGATCTGTTAGACGCG
GCAGGCATCTACCCCAACGAAAAAGTCGCCATCGTCAACAACAACAACGGCGAACGTTTTGAAACCTATACCATTTCAGG
TAAACGCGGCAGCGGCGTGATTTGTCTGAACGGTGCTGCGGCAAGGCTGGTGCAGAAAGGCGATATCGTCATCATCATGT
CTTACGTCCAACTCTCCGAACCCGAAATCGCCGCACACGAACCCAAAGTCGTCTTGGTAGACGGAAACAACAAAATCCGC
GACATCATCTCCTATGAGCCGCCGCACACCGTGCTGTAA

Upstream 100 bases:

>100_bases
ACCGCAGAGATGGAAAATATCGAGGTCAGAATCAACACCGTAAAAAACGTTTTAAAAACCTTGCAAAACAGATGCCTGCC
CAAATAAAGCCGACACCGCA

Downstream 100 bases:

>100_bases
TTCCGCAAACGGACATCGATTATGGATATTAAAATCAACGACTTCACCCTCGGCAACAACTCGCCCTTCGTCCTATTCGG
CGGCATCAACGTTTTGGAAA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPSETPFSLSESRHYEFEGNSTIIRHSDFQTASRPSDRTQTKRKYMFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDA
AGIYPNEKVAIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKIR
DIISYEPPHTVL

Sequences:

>Translated_172_residues
MPSETPFSLSESRHYEFEGNSTIIRHSDFQTASRPSDRTQTKRKYMFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDA
AGIYPNEKVAIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKIR
DIISYEPPHTVL
>Mature_171_residues
PSETPFSLSESRHYEFEGNSTIIRHSDFQTASRPSDRTQTKRKYMFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAA
GIYPNEKVAIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKIRD
IISYEPPHTVL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=115, Percent_Identity=51.304347826087, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 19114; Mature: 18983

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSETPFSLSESRHYEFEGNSTIIRHSDFQTASRPSDRTQTKRKYMFRTMLGGKIHRATV
CCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE
TEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTISGKRGSGVICLNGAA
ECCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEECCHH
ARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKIRDIISYEPPHTVL
HEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
PSETPFSLSESRHYEFEGNSTIIRHSDFQTASRPSDRTQTKRKYMFRTMLGGKIHRATV
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE
TEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTISGKRGSGVICLNGAA
ECCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEECCHH
ARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKIRDIISYEPPHTVL
HEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA