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The map label for this gene is 161870043

Identifier: 161870043

GI number: 161870043

Start: 1058423

End: 1058974

Strand: Reverse

Name: 161870043

Synonym: NMCC_1076

Alternate gene names: NA

Gene position: 1058974-1058423 (Counterclockwise)

Preceding gene: 161870048

Following gene: 161870042

Centisome position: 49.18

GC content: 56.34

Gene sequence:

>552_bases
ATGCTGCAATGGCACACGCGCGTCGGGCTGTTTATCCTTTTCCTGCTCGTATTTCGCCTCTGCTGGAGCATTTGGGGCAG
CGATACCGCCCGTTTTTCCTGTTTCGTCCAAGGCTGGGCAGGCATACGCGGCTATCTGAAAAACGGTATTCCCGAACACA
TCCAGCCCGGACACAACCCCTTGGGCGCACTGATGGTCGTCGCGCTTTTGGCCGCCGTCTCATTTCAAGTCGGCACAGGG
CTTTTTGCCGCCGATGAAAACACCTTCAGCACCAACGGCTACCTCAACCATTTGGTTTCCGAGCATACGGGCAGCCTGAT
GCGGAAAATCCACCTCAACTTTTTCAAGCTGCTCGCCGTTTTTTCCGCCATCCATATCGCCGCCGTCGCCGCATACCGCC
TATTCAAAAAGAAAAACCTCGTCCTCCCGATGATAACCGGCTTCAAATACATCGAAGGCAAAACCTCAATCCGCTTTGCC
GGCAAAGCCGCGCTTGCCGCCGCATTATCGGTTGCCGCGCTTGCCGCAGCCGCCATCCTGCTCCTGTCCTGA

Upstream 100 bases:

>100_bases
AAACAAAACCAAAGTCTGGGACCTCCCCACCCGCCTTTTCCACTGGCTGCTTGCCGCGTCCCTGCCCTTTATGTGGTATA
GCGCGAAAGCCGGCGGCGAT

Downstream 100 bases:

>100_bases
AACCCGACATCAATGCCGTCTGAAGCCCTTTTCGCCCTTCGGACGGCATCCCCTCTCCGCGCAAACGGTCTGAATGCCCG
AAACGGCTTCAGGCCGTTTT

Product: nickel-dependent hydrogenase, b-type cytochrome subunit

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLQWHTRVGLFILFLLVFRLCWSIWGSDTARFSCFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTG
LFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIHIAAVAAYRLFKKKNLVLPMITGFKYIEGKTSIRFA
GKAALAAALSVAALAAAAILLLS

Sequences:

>Translated_183_residues
MLQWHTRVGLFILFLLVFRLCWSIWGSDTARFSCFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTG
LFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIHIAAVAAYRLFKKKNLVLPMITGFKYIEGKTSIRFA
GKAALAAALSVAALAAAAILLLS
>Mature_183_residues
MLQWHTRVGLFILFLLVFRLCWSIWGSDTARFSCFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTG
LFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIHIAAVAAYRLFKKKNLVLPMITGFKYIEGKTSIRFA
GKAALAAALSVAALAAAAILLLS

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19934; Mature: 19934

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQWHTRVGLFILFLLVFRLCWSIWGSDTARFSCFVQGWAGIRGYLKNGIPEHIQPGHNP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LGALMVVALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAV
HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAIHIAAVAAYRLFKKKNLVLPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAIL
HHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LLS
HCC
>Mature Secondary Structure
MLQWHTRVGLFILFLLVFRLCWSIWGSDTARFSCFVQGWAGIRGYLKNGIPEHIQPGHNP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LGALMVVALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAV
HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAIHIAAVAAYRLFKKKNLVLPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAIL
HHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LLS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA