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The map label for this gene is insH1 [C]

Identifier: 161869902

GI number: 161869902

Start: 935741

End: 936748

Strand: Reverse

Name: insH1 [C]

Synonym: NMCC_0934

Alternate gene names: 161869902

Gene position: 936748-935741 (Counterclockwise)

Preceding gene: 161869903

Following gene: 161869892

Centisome position: 43.5

GC content: 53.57

Gene sequence:

>1008_bases
ATGAGCACCTTCTTCCAGCAAACCGCCCAAGCCATGATTGCCAAACACATCGACCGTTTCCCGCTATTGAAGTTGGACCA
GGTGATTGATTGGCAGCCGATCGAGCAGTACCTGAACCGTCAAAAAACCCGTTACCTCCGAGACCACCGCGGTCGTCCCG
CCTGTCCCCTGTTGTCCATGTTCAAAGCCGTCCTGCTCGGACAATGGCACAGTCTCTCCGATCCCGAACTCGAACACAGC
CTCATCACCCGCATCGATTTCAACCTGTTTTGCCGTTTTGACGAACTAAGCATCCCCGATTACAGCACCTTATGCCGCTA
CCGCAATTGGCTGGCGCAAGACGACACCCTGTCCGAACTGTTGGAACTGATTAACTGCCAACTGACCGAAAAAGGCTTAA
AAGTAGAGAAAGCATCCGCCGCCGTCATTGACGCCACCATTATTCAGACCGCCGGCAGCAAACAGCGTCAGGCCATAGAA
GTTGACGAAGAAGGACAAGTCAGCGGCCAAACCACACCGAGTAAGGACAGCGATGCCCGTTGGATCAAGAAAAACGGCCT
CTACAAACTCGGTTACAAACAACATACACGTACCGATGCAGAAGGCTATATCGAGAAACTGCACATTACCCCCGCCAATG
CCCATGAGTGCAACCACCTGTCGCCTTTGCTGGAAGGGATAGCCGACGGTACGACCGTCTATGCCGACAAAGGCTACGAC
AGTGCGGAAAACCGGCAACATCTGAAAGAACATCAGTTGCAGGACGGCATTATGCGCAAAGCCCGCCGCAACCGTCCGCT
GTCGGAAGCGCAAACCAAACGCAACCGGTATTTGTCGAAGACCCGTTATGTGGTTGAACAGAGCTTCGGTACGCTGCACC
GTAAATTCCGCTACGCCCGGGCAGCCTATTTCGGACTGATTAAAGTGAGTGCGCAAAGCCATCTGAAGGCGATGTGTTTG
AACCTGTTGAAAGCCGCCAACAGGCTAAGTGTGCCTGTTGCCGCCTAA

Upstream 100 bases:

>100_bases
CGGAAGGTTTGAAGGGAAGGGTGGCGATTTGCCGCCTGAGACCTTTGCAAAATTCCCCAAAATCCCCTAAATTCCCACCA
AGACATTTAGGAGATTTCTC

Downstream 100 bases:

>100_bases
AAGGCGACCCGGATGCCTGATTATCGGGTATCCGGGGAGGATTAAAGGGATATTTGGGTAGAATTAGGCGGTATTTGGGG
CGAAAACAGCTGAAAACCTG

Product: IS1106 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIE
VDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYD
SAENRQHLKEHQLQDGIMRKARRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSVPVAA

Sequences:

>Translated_335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIE
VDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYD
SAENRQHLKEHQLQDGIMRKARRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSVPVAA
>Mature_334_residues
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSMFKAVLLGQWHSLSDPELEHSL
ITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEV
DEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDS
AENRQHLKEHQLQDGIMRKARRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLN
LLKAANRLSVPVAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789921, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789612, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789355, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788518, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788342, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787592, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786877, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786764, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786453, Length=313, Percent_Identity=27.4760383386581, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787634, Length=313, Percent_Identity=26.8370607028754, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 38403; Mature: 38272

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSM
CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHHCCCCCCCCHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
SAENRQHLKEHQLQDGIMRKARRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPACPLLSM
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHHCCCCCCCCHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR
HHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
SAENRQHLKEHQLQDGIMRKARRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]