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The map label for this gene is 161869833

Identifier: 161869833

GI number: 161869833

Start: 867075

End: 867572

Strand: Reverse

Name: 161869833

Synonym: NMCC_0864

Alternate gene names: NA

Gene position: 867572-867075 (Counterclockwise)

Preceding gene: 161869835

Following gene: 161869830

Centisome position: 40.29

GC content: 54.82

Gene sequence:

>498_bases
ATGACAACAACCATACCACCACGACAGGACACATTCAATATGAAAACCCAAATCAGCCTTGCTGCTGCCGCCATCACACT
GCTCCTTTCCGCCTGCGGAGGCAGCGGAATACCTTCCCAACCCAAAGGCGAAATTTCCGAAAACCGCACCGCCGCGTTCA
AATCTATGATGCCCGACTTCTCGCGTATGGGCAAAATGGTCAAAGGCGAAGAGCCTTACGATGTCGAAAAATTCAAACAG
GCGGCAGCGGCGTTTGCCGACAGCAGCAAAAAACCGTTTACGCTTTTTGAGTCCGACCCGCAAGGCAACGGGCGCGCACT
GCCCGCCGTTTGGTCGGATGGTGCAAAATTTGAAGCCGAAAAAACAAAATTCGCCGCCGCCGTCGAAAAACTCAACGCCG
CCGCCCAAACCGGCAAACTGGACGAAATCAAAGCCGCCTACGGCGAAACCGGCGCAAGCTGCAAATCCTGCCACGACAGT
TTCCGCGCGCCCGAATAA

Upstream 100 bases:

>100_bases
ACCGGTAATTAAAACAGCCATTGTTTTTCCTTTCTTTCTCGTTTCCCAAACCTGTTTCAGGTATCATAACGCTCTTCAGA
CGGCATCGCGCCGGCTGAAA

Downstream 100 bases:

>100_bases
CATCCAAAACAAAACAATGCCGTCTGAAGACTTCAGACGGCATTTTCTTTGCCATTTCAGCACACGCAAAGCAATCAGAA
ATTATCGTCAATCCAAATGA

Product: C-type cytochrome

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTTTIPPRQDTFNMKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMMPDFSRMGKMVKGEEPYDVEKFKQ
AAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGAKFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDS
FRAPE

Sequences:

>Translated_165_residues
MTTTIPPRQDTFNMKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMMPDFSRMGKMVKGEEPYDVEKFKQ
AAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGAKFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDS
FRAPE
>Mature_164_residues
TTTIPPRQDTFNMKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMMPDFSRMGKMVKGEEPYDVEKFKQA
AAAFADSSKKPFTLFESDPQGNGRALPAVWSDGAKFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSF
RAPE

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 17579; Mature: 17448

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTIPPRQDTFNMKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMMPDF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCH
SRMGKMVKGEEPYDVEKFKQAAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGAKFEAE
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH
KTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TTTIPPRQDTFNMKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMMPDF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCH
SRMGKMVKGEEPYDVEKFKQAAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGAKFEAE
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH
KTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4360249; 11060017; 11300792 [H]