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The map label for this gene is rsmI [H]

Identifier: 161869307

GI number: 161869307

Start: 317542

End: 318252

Strand: Direct

Name: rsmI [H]

Synonym: NMCC_0312

Alternate gene names: 161869307

Gene position: 317542-318252 (Clockwise)

Preceding gene: 161869306

Following gene: 161869312

Centisome position: 14.75

GC content: 52.32

Gene sequence:

>711_bases
ATGTCTCCTGTTTTGTATTTGATTCCTACGCCTTTGGGTACGCCCGATACGCCGTGCCTGTTGCCGCATGAACAACGAGC
GGTTGTCGGGCTGACGGATTTTGTCGTGGAAGCGGAAAAAACGGCGCGCGCGCATTTGAAACATTTGGGCGTGACAATGC
CTATCCGCGAACTGAATTTGCAAACGCTGAACGAACACACGGATTTGAAGACTTTGCCGGAATTGCTGAAACCTTTGCAA
GAAGGGCGCAGTATGGGCATTGTCAGCGAGGCGGGTTGCCCGGCTGTGGCTGATCCGGGTGCGAATTTGGTGGCATTGGC
GCATAAACACGGTTTTGAAGTACGGCCTTTGGTCGGTCCGTCCAGCTTGTTGCTGGCGCTGATGGCTTCGGGTGCGAATG
GGCAGAACTTTGCGTTTAAGGGTTATTTGCCGTCTGAAAAAAATGAGCGGATTCAGAGTTTGAAGGCTTTGGAACAACGT
TCGCGCCAGCAGAATGAAACGCAGCTGTTTATCGAAACGCCGTATCGCAACGATGTGTTGTTGGCGGATGCGGTGGAAAA
CCTGCATCCTGAAACGCGCTTGTGCACGGCTACGGATTTGACGTTGCCGACTCAGTCGGTGGTCAGTAAAACGGTTGCGG
ATTGGCGCAGGATGAAGGAAATGCCCAATCTGAAAAAACGCCCGACGATTTTTGTGATGTATGCAGGTTGA

Upstream 100 bases:

>100_bases
GTCGATTTCTTGAAAAATGAGGGCGTGGAGGTTCTGTAACTGCCCGTTTATGCCGTCTGAAAGGCTCAGACGGCATTTTT
AACCGATGAATGAGGGAATG

Downstream 100 bases:

>100_bases
AGATTTCCGCCCCGATAGGGGGTGAACAATAAAAATGCCGTCTGAACAGGTTTCAGACGGCATTTTTCATGCTGCGGCAT
TTAGGAAACGACTTCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTARAHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQ
EGRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQR
SRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRRMKEMPNLKKRPTIFVMYAG

Sequences:

>Translated_236_residues
MSPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTARAHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQ
EGRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQR
SRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRRMKEMPNLKKRPTIFVMYAG
>Mature_235_residues
SPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTARAHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQE
GRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQRS
RQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRRMKEMPNLKKRPTIFVMYAG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=236, Percent_Identity=31.3559322033898, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26033; Mature: 25901

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTARAHLKHLGVTMPIRELNL
CCCEEEEEECCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
QTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGP
HHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEEECCCH
SSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQRSRQQNETQLFIETPYRNDVL
HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEE
LADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRRMKEMPNLKKRPTIFVMYAG
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTARAHLKHLGVTMPIRELNL
CCEEEEEECCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
QTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGP
HHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEEECCCH
SSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQRSRQQNETQLFIETPYRNDVL
HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEE
LADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRRMKEMPNLKKRPTIFVMYAG
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]