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The map label for this gene is sspB [H]

Identifier: 161869258

GI number: 161869258

Start: 276138

End: 276419

Strand: Direct

Name: sspB [H]

Synonym: NMCC_0263

Alternate gene names: 161869258

Gene position: 276138-276419 (Clockwise)

Preceding gene: 161869257

Following gene: 161869259

Centisome position: 12.82

GC content: 56.38

Gene sequence:

>282_bases
ATGCAGTACGTCCGCGACAACGAAATTATGCTCAACATCGGCGCGACCGCCACGCAAAACCTTCAAATCGACAACGATTG
GATCAGCTTTTCCGCCCGCTTCGGCGGACAGGCGCACGACATATGGATACCTGTCGGACACGTCCTCAGCCTTTTCGCAC
GGGAGACCGGCGAAGGTATGGGGTTTGAATTGGAAGCGTATCGCCCCGACACGCCGCCTGAAAACACCTCTGCCGAAACC
GCGCCCCGGCCCGCCAAAAAAGGCTTGAAATTGGTCAAATAA

Upstream 100 bases:

>100_bases
CACCAAACCCTACATCCTCCGCGCACTTTGCGAATGGTGCAGCGATAACAGCCTCACGCCGCACATTCTTGTCTGGGTCA
ACGAACACACGCGTGTCCCC

Downstream 100 bases:

>100_bases
ATCTATGCCGTCTGAACGGAATCGTGTTTCAGACGGCATTTTGTCCGATGGGGCGCAAACGGAATCCGTTTATCGGCAAA
ACCCGTTTCGGTGTATCGAA

Product: stringent starvation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MQYVRDNEIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELEAYRPDTPPENTSAET
APRPAKKGLKLVK

Sequences:

>Translated_93_residues
MQYVRDNEIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELEAYRPDTPPENTSAET
APRPAKKGLKLVK
>Mature_93_residues
MQYVRDNEIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELEAYRPDTPPENTSAET
APRPAKKGLKLVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=82, Percent_Identity=43.9024390243902, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 10331; Mature: 10331

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYVRDNEIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGM
CCCCCCCEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHCCCCC
GFELEAYRPDTPPENTSAETAPRPAKKGLKLVK
CEEEEEECCCCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MQYVRDNEIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGM
CCCCCCCEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHCCCCC
GFELEAYRPDTPPENTSAETAPRPAKKGLKLVK
CEEEEEECCCCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]