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The map label for this gene is sspA [H]

Identifier: 161869257

GI number: 161869257

Start: 275350

End: 275955

Strand: Direct

Name: sspA [H]

Synonym: NMCC_0262

Alternate gene names: 161869257

Gene position: 275350-275955 (Clockwise)

Preceding gene: 161869256

Following gene: 161869258

Centisome position: 12.79

GC content: 53.96

Gene sequence:

>606_bases
ATGATGACCCTCTATTCCGGCATTACCTGCCCCTTCAGCCACCGCTGCCGCTTCGTTTTGTACGAAAAAGGCATGGATTT
TGAAATCAAAGACGTCGATATTTACAACAAGCCCGAAGACCTCGCCGTCATGAACCCGTATAACCAAGTTCCCGTGCTGG
TCGAGCGCGATTTGGTGCTGCACGAGTCCAACATCATCAACGAATACATCGACGAACGCTTCCCCCATCCGCAGCTTATG
CCCGGTGATCCCGTTATGCGCGGCAGGGGCCGGCTGGTGCTGTACCGTATGGAAAAAGAATTGTTCAACCACGTCCAAGT
TTTGGAAAACCCCGCCGCCACCAACAAGGAACAGGCAAAAGCGCGCGAAGCCATCGGCAACGGTCTGACCATGCTTGCCC
CTTCGTTCAGCAAAAGCAAATACATCCTCGGCGAAGATTTTTCTATGATTGATGTCGCCCTTGCTCCGCTGCTGTGGCGG
CTCGACCACTACGATGTCAAACTGGGCAAAAGTGCCGCGCCGCTGCTCAAATACGCCGAGCGCATCTTCCAGCGCGAAGC
CTTTATCGAAGCACTGACACCCGCCGAAAAAGCCATGCGCAAATAA

Upstream 100 bases:

>100_bases
CCGAATTTCTGGATTAAGTGCCGGAAATCGCGTATAATTGCGCGATTAAACCTTTATAAATCAGCCGTTTTGTAGGCATC
ACACAGGAGCGACAATTATT

Downstream 100 bases:

>100_bases
GTCCGAAATGCTTGCAAAACCCACCGTTTTGCAGGCATTTTCCTATTTTGGCGTACAACACGGAACCCATTATGCCCACT
TCCACCAAACCCTACATCCT

Product: stringent starvation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLM
PGDPVMRGRGRLVLYRMEKELFNHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK

Sequences:

>Translated_201_residues
MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLM
PGDPVMRGRGRLVLYRMEKELFNHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK
>Mature_201_residues
MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLM
PGDPVMRGRGRLVLYRMEKELFNHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4758484, Length=200, Percent_Identity=31.5, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI300360534, Length=194, Percent_Identity=31.4432989690722, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI38016131, Length=184, Percent_Identity=30.4347826086957, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI300360569, Length=175, Percent_Identity=30.8571428571429, Blast_Score=80, Evalue=9e-16,
Organism=Homo sapiens, GI300360532, Length=195, Percent_Identity=29.7435897435897, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI300360567, Length=178, Percent_Identity=29.7752808988764, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI300360571, Length=169, Percent_Identity=30.1775147928994, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI22202624, Length=177, Percent_Identity=27.1186440677966, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1789624, Length=201, Percent_Identity=45.771144278607, Blast_Score=177, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17551302, Length=178, Percent_Identity=29.2134831460674, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355779, Length=176, Percent_Identity=26.7045454545455, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23165; Mature: 23165

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVL
CCEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCEEEECCCHH
HESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELFNHVQVLENPAATNKEQAK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHH
AREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWRLDHYDVKLGKSAAPLLKYAE
HHHHHCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHH
RIFQREAFIEALTPAEKAMRK
HHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVL
CCEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCEEEECCCHH
HESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELFNHVQVLENPAATNKEQAK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHH
AREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWRLDHYDVKLGKSAAPLLKYAE
HHHHHCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHH
RIFQREAFIEALTPAEKAMRK
HHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]