Click here to switch to the map view.

The map label for this gene is ydjC [C]

Identifier: 161525302

GI number: 161525302

Start: 2345386

End: 2346270

Strand: Reverse

Name: ydjC [C]

Synonym: Bmul_2132

Alternate gene names: 161525302

Gene position: 2346270-2345386 (Counterclockwise)

Preceding gene: 161525303

Following gene: 161525301

Centisome position: 68.04

GC content: 74.24

Gene sequence:

>885_bases
GTGACGACGCAGCGGGCGGCGCGGGCGCTCATCTTCACCGCGGACGACTTCGGGCTGCACGAGCGTGTGAATGCGGCGGT
CGAGCGCGCGCATCGCGACGGCGTGCTGAACGCCGCGAGCCTGATGGTCGGCGCGCCGGCCGCGCAGGATGCGATCGCAC
GCGCGCGGCGGCTGCCGTCGCTCGCGGTCGGGTTGCATCTGGTGCTCGCGGACGGCCCCGCGACGCTGCCCGCGCGCGAG
ATTCCGGCGCTGGTCGGCGCCGACGGCCGCTTCGGCGGCGCGATGGCGAAGGACGGCTGCCGGTTCTTCTTTCTGCCGCA
CGTGCGCGCGCAACTGCGGCGCGAGATCCGTGCGCAGTTCGAAGCGTTCGCGGCGACGGGCCTGCCGCTCGATCACGTGA
ACGCGCACAAGCACTTCCATCTGCATCCGACCGTGCTGTCGATGATCGTCGAGATCGGGCGCGACTACGGTCTGCGCGCG
GTGCGGCTGCCGTACGAGACGACCGCGCCCGTGTGGCTGCGGCCGTGGATCGCGCTCGTGCGCGCGCAGCTCGACCGCGC
GGGGCTCGCGCATAACGACTACGTGGTCGGCATCGCGCAGACGGGCCGGATGGACGAGGCCGTGCTGCTCGATGCGCTCG
CGGCGCTGCCGCCCGGTGTCGGCGAGATCTACTGTCATCCGGCCGAAGCGGGCGACGGGCCGATCACGCCGACGATGGCC
GACTACCGTCCCGCCGACGAACTCGACGCGCTGCTGTCGCCGCGCGTCGCCGCGGCGCTCGCGCGCGCGGGCGTCGCGAC
CGGCGGCTTCGCGGCCGTGTTCGGCACGCGCGACGCGCAGCGCGGCGCACCCGCGGCGCGCAGACCGGGAGCGCAGCCGT
CATGA

Upstream 100 bases:

>100_bases
GATCGTGCGCGAGATGCTGACGAGCTGGGACATGATGAAGCGCCGTCTGCGCGAGGGCGTCGAATTCTTCCGTTTCCTGC
GCGCGCACGAGGCCTGATTC

Downstream 100 bases:

>100_bases
GCAAATGGTTCAAATGGCTCGGCTGGCCGATCGGCATCGGCATCCTGCTCGCGCTGGGGCTGCACGAGGGCATCGGCGAC
GTGTCGCAGATGCTCGCGCG

Product: hopanoid biosynthesis associated protein HpnK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTTQRAARALIFTADDFGLHERVNAAVERAHRDGVLNAASLMVGAPAAQDAIARARRLPSLAVGLHLVLADGPATLPARE
IPALVGADGRFGGAMAKDGCRFFFLPHVRAQLRREIRAQFEAFAATGLPLDHVNAHKHFHLHPTVLSMIVEIGRDYGLRA
VRLPYETTAPVWLRPWIALVRAQLDRAGLAHNDYVVGIAQTGRMDEAVLLDALAALPPGVGEIYCHPAEAGDGPITPTMA
DYRPADELDALLSPRVAAALARAGVATGGFAAVFGTRDAQRGAPAARRPGAQPS

Sequences:

>Translated_294_residues
MTTQRAARALIFTADDFGLHERVNAAVERAHRDGVLNAASLMVGAPAAQDAIARARRLPSLAVGLHLVLADGPATLPARE
IPALVGADGRFGGAMAKDGCRFFFLPHVRAQLRREIRAQFEAFAATGLPLDHVNAHKHFHLHPTVLSMIVEIGRDYGLRA
VRLPYETTAPVWLRPWIALVRAQLDRAGLAHNDYVVGIAQTGRMDEAVLLDALAALPPGVGEIYCHPAEAGDGPITPTMA
DYRPADELDALLSPRVAAALARAGVATGGFAAVFGTRDAQRGAPAARRPGAQPS
>Mature_293_residues
TTQRAARALIFTADDFGLHERVNAAVERAHRDGVLNAASLMVGAPAAQDAIARARRLPSLAVGLHLVLADGPATLPAREI
PALVGADGRFGGAMAKDGCRFFFLPHVRAQLRREIRAQFEAFAATGLPLDHVNAHKHFHLHPTVLSMIVEIGRDYGLRAV
RLPYETTAPVWLRPWIALVRAQLDRAGLAHNDYVVGIAQTGRMDEAVLLDALAALPPGVGEIYCHPAEAGDGPITPTMAD
YRPADELDALLSPRVAAALARAGVATGGFAAVFGTRDAQRGAPAARRPGAQPS

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=293, Percent_Identity=30.7167235494881, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1788028, Length=271, Percent_Identity=27.3062730627306, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 31203; Mature: 31072

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQRAARALIFTADDFGLHERVNAAVERAHRDGVLNAASLMVGAPAAQDAIARARRLPS
CCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCH
LAVGLHLVLADGPATLPAREIPALVGADGRFGGAMAKDGCRFFFLPHVRAQLRREIRAQF
HHHCEEEEEECCCCCCCHHHCCHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
EAFAATGLPLDHVNAHKHFHLHPTVLSMIVEIGRDYGLRAVRLPYETTAPVWLRPWIALV
HHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
RAQLDRAGLAHNDYVVGIAQTGRMDEAVLLDALAALPPGVGEIYCHPAEAGDGPITPTMA
HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
DYRPADELDALLSPRVAAALARAGVATGGFAAVFGTRDAQRGAPAARRPGAQPS
CCCCHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTQRAARALIFTADDFGLHERVNAAVERAHRDGVLNAASLMVGAPAAQDAIARARRLPS
CCHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCH
LAVGLHLVLADGPATLPAREIPALVGADGRFGGAMAKDGCRFFFLPHVRAQLRREIRAQF
HHHCEEEEEECCCCCCCHHHCCHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
EAFAATGLPLDHVNAHKHFHLHPTVLSMIVEIGRDYGLRAVRLPYETTAPVWLRPWIALV
HHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
RAQLDRAGLAHNDYVVGIAQTGRMDEAVLLDALAALPPGVGEIYCHPAEAGDGPITPTMA
HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
DYRPADELDALLSPRVAAALARAGVATGGFAAVFGTRDAQRGAPAARRPGAQPS
CCCCHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA