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The map label for this gene is yagI [H]

Identifier: 161525273

GI number: 161525273

Start: 2308428

End: 2309252

Strand: Direct

Name: yagI [H]

Synonym: Bmul_2103

Alternate gene names: 161525273

Gene position: 2308428-2309252 (Clockwise)

Preceding gene: 161525272

Following gene: 161525274

Centisome position: 66.94

GC content: 71.64

Gene sequence:

>825_bases
GTGTCGACATCTGTCATCCCCCCCGCTCCCCGAGAACGCGAATCGTCGCCGGACGAAATCACCGCGCTCGCGCGCGGCCT
TGCGGTGCTGCGCCGCATCGCGGCCGCCGACGCGCCCGTCAGCAACCGCGAATTGACCGAGCTGACCGGCATTCCGAAGC
CCACCGTGTCGCGCATCACCGCGACGCTCGTCAGCGCCGGCTTCCTGTTCCAGCTGCCGGACAGCGAGCGCTTCGTGCTG
ACCGCGTCGGTGCTCGAGCTGAGCCACGGTTTCCTGCGCAACTTCGACATCCGCGCGCGCTCGCGGCCGTTCATGATCGA
GCTCGCCGAGCGCACGTCGCTGTCCGTGCATCTCGCGGTGCGCGACCGGCTCGACATGGTCGCGATCGACGTGATCCGCC
CGCGCTCGGCGGTGCTCGTCACGCGGCTCGAGATCGGCTCGCGGATGGACATCGCGCGCACGGCGGTCGGCCGCGCGTAT
CTCGCCGCGCTCGAGGACGACGAGCGGCGTGCGCTGCTCGACGCGCTGCGCGCGACGGCCGGCGACGACTGGCCGCACGT
GTTCGCGCGGCTCAATCCGGCGCTCGACGACGCGATGCGCGACGGCCACGCGATCGCGATCGGCGAATGGCGCGAAGGGC
TCAACGCGGTCGCGGCCGGTTTCGTCGGGCCGTCCGGCCAGCGCTATTCGGTGAACTGCGGCGGCGCATCGCACCAGTGC
CCGCCGGAATGGTTGCGCGAACACGTGGTGCCGGCGCTGCACGAATGCATCGCCAAGATCACGCGCGAGATCGGCGGCGC
ACCGGCGCGGCGCGTCGCCGCGTAA

Upstream 100 bases:

>100_bases
ATCGCATGAACGGTTCATTCGGCGAACATGCATCTTTTGACAATCATCTGACAATATTAAGTAAACTGAAATAGAGTTTC
GGAAATAGAGAGAACGCCTC

Downstream 100 bases:

>100_bases
GCGTGCCGTCATCGTTTCGTCGTCTTCTGTAACGACCGTAACCCGTTGAAAGATAGAGCACTGGACTGTAACGGGGACGG
GACGTAGCATCATGCCCAAT

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTSVIPPAPRERESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVL
TASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAY
LAALEDDERRALLDALRATAGDDWPHVFARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQC
PPEWLREHVVPALHECIAKITREIGGAPARRVAA

Sequences:

>Translated_274_residues
MSTSVIPPAPRERESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVL
TASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAY
LAALEDDERRALLDALRATAGDDWPHVFARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQC
PPEWLREHVVPALHECIAKITREIGGAPARRVAA
>Mature_273_residues
STSVIPPAPRERESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVLT
ASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYL
AALEDDERRALLDALRATAGDDWPHVFARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQCP
PEWLREHVVPALHECIAKITREIGGAPARRVAA

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=203, Percent_Identity=27.0935960591133, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788131, Length=259, Percent_Identity=26.2548262548263, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082359, Length=179, Percent_Identity=26.2569832402235, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI145693096, Length=193, Percent_Identity=27.4611398963731, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29787; Mature: 29656

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVIPPAPRERESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
HHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEE
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRALLDALRATA
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GDDWPHVFARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQC
CCCHHHHHHHHCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PPEWLREHVVPALHECIAKITREIGGAPARRVAA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
STSVIPPAPRERESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
HHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEE
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRALLDALRATA
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GDDWPHVFARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQC
CCCHHHHHHHHCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PPEWLREHVVPALHECIAKITREIGGAPARRVAA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]