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The map label for this gene is yraR [H]

Identifier: 161525237

GI number: 161525237

Start: 2261580

End: 2262209

Strand: Reverse

Name: yraR [H]

Synonym: Bmul_2067

Alternate gene names: 161525237

Gene position: 2262209-2261580 (Counterclockwise)

Preceding gene: 161525238

Following gene: 161525236

Centisome position: 65.6

GC content: 70.63

Gene sequence:

>630_bases
ATGAAACTGCTGCTGGTCGGCGCGACCGGTCTGGTCGGACGCCACGTCCTCGATGCGGCGCTCGCCGATCCGCGCGTCGC
GCGCATCGTCGTCATCGCGCGCCGTCCGTTGTCACCGCATCCGAAGCTGCAGGCGATGACGGTCGACTTCGAGCAGCTGC
CCGCCGACGCGGACTGGTGGCGTGCCGACGCCGTGATCTGCACGCTGGGCACGACGATGCGCATCGCCGGATCGCAGGCG
GCATTCCGGCGCGTCGATCACGACTATCCGCTCGCGGTCGCGCGCCTCGCGCATCGGCACGGCACGCCGACCTACGTACT
GAATTCCGCGCTCGGCGCGGACCCGGCGTCACGCGTGTTCTACAGTCGCGTAAAGGGCGAAGTGGAACGCGCGCTCGCGG
ACGTCGGGTTCACGTCGCTGACGTACGTGCGTCCCGGCCTGATCGGCGGCAACCGCGACGAGTTCCGGCTCGGCGAGCGC
GCGTTGCTGTTCGCACTGCGGATCGCGGGCGCGCTGCTGCCGCCGAAGTGGCGCGTGAATCCCGCGCCGCACATTGCGCG
CGCATTGCTCGATGCCGCGCTCGACGCGCGGCCGGGCGTGCATGTCGTCGCGTCGGACCGGCTGATCTGA

Upstream 100 bases:

>100_bases
CGAGCATGTCGCGGCAAAGGGCGGGCGGTTCGTAGCGCGGGTTTGTAGCGGCGCTGGACGTCAGCAATGAGCGCAACGTA
ATCCAACGGAGCGATCGAAC

Downstream 100 bases:

>100_bases
GCGGCGAACGAACGGCCAACGGCGTCGCTGATCGTCGCCGGTCGGTGACGATACGGCCGCCGCCCTTTCTGTTTCCATAC
ATCGCCTTACATCACGCTGC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLLLVGATGLVGRHVLDAALADPRVARIVVIARRPLSPHPKLQAMTVDFEQLPADADWWRADAVICTLGTTMRIAGSQA
AFRRVDHDYPLAVARLAHRHGTPTYVLNSALGADPASRVFYSRVKGEVERALADVGFTSLTYVRPGLIGGNRDEFRLGER
ALLFALRIAGALLPPKWRVNPAPHIARALLDAALDARPGVHVVASDRLI

Sequences:

>Translated_209_residues
MKLLLVGATGLVGRHVLDAALADPRVARIVVIARRPLSPHPKLQAMTVDFEQLPADADWWRADAVICTLGTTMRIAGSQA
AFRRVDHDYPLAVARLAHRHGTPTYVLNSALGADPASRVFYSRVKGEVERALADVGFTSLTYVRPGLIGGNRDEFRLGER
ALLFALRIAGALLPPKWRVNPAPHIARALLDAALDARPGVHVVASDRLI
>Mature_209_residues
MKLLLVGATGLVGRHVLDAALADPRVARIVVIARRPLSPHPKLQAMTVDFEQLPADADWWRADAVICTLGTTMRIAGSQA
AFRRVDHDYPLAVARLAHRHGTPTYVLNSALGADPASRVFYSRVKGEVERALADVGFTSLTYVRPGLIGGNRDEFRLGER
ALLFALRIAGALLPPKWRVNPAPHIARALLDAALDARPGVHVVASDRLI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=197, Percent_Identity=33.502538071066, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI148728168, Length=197, Percent_Identity=33.502538071066, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI148728164, Length=197, Percent_Identity=33.502538071066, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI148728166, Length=197, Percent_Identity=33.502538071066, Blast_Score=95, Evalue=5e-20,
Organism=Escherichia coli, GI87082218, Length=218, Percent_Identity=35.3211009174312, Blast_Score=102, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71983631, Length=212, Percent_Identity=34.9056603773585, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6320840, Length=160, Percent_Identity=33.125, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 22682; Mature: 22682

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLVGATGLVGRHVLDAALADPRVARIVVIARRPLSPHPKLQAMTVDFEQLPADADWW
CEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEECHHHCCCCCCHH
RADAVICTLGTTMRIAGSQAAFRRVDHDYPLAVARLAHRHGTPTYVLNSALGADPASRVF
HHCEEEEECCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCHHHHHH
YSRVKGEVERALADVGFTSLTYVRPGLIGGNRDEFRLGERALLFALRIAGALLPPKWRVN
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAPHIARALLDAALDARPGVHVVASDRLI
CCHHHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MKLLLVGATGLVGRHVLDAALADPRVARIVVIARRPLSPHPKLQAMTVDFEQLPADADWW
CEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEECHHHCCCCCCHH
RADAVICTLGTTMRIAGSQAAFRRVDHDYPLAVARLAHRHGTPTYVLNSALGADPASRVF
HHCEEEEECCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCHHHHHH
YSRVKGEVERALADVGFTSLTYVRPGLIGGNRDEFRLGERALLFALRIAGALLPPKWRVN
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAPHIARALLDAALDARPGVHVVASDRLI
CCHHHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]