| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yxlA [H]
Identifier: 161525236
GI number: 161525236
Start: 2259776
End: 2261380
Strand: Reverse
Name: yxlA [H]
Synonym: Bmul_2066
Alternate gene names: 161525236
Gene position: 2261380-2259776 (Counterclockwise)
Preceding gene: 161525237
Following gene: 161525234
Centisome position: 65.58
GC content: 66.6
Gene sequence:
>1605_bases ATGCTTGCCCGCGTCGTGCCGCATGCGCGTCACCGTGCTCGTCGCGCCCGTCGCGCATGCATGGCGCCGCTCGGCGATCC ACGGCGCGCGCGTCGAAGCGCCGAACCGACGGCTCGACACGTTCCGCGTCCCGTTCGAACCATTTGTCGTCCCGAGTCAT CTGGAGATTTGCCCGTGTCAACGCATCCCACTGGAAACGCCGGCGGCTTGATCGAAGTCCGCTCGATCGATTTCATTCCC GACGCCGAACGTCACGGCGGCTTGCTGAGCCAGTTCACGTTGTGGCTCTCGGCGAACATGCAGATCACCGCGATCGTCAC GGGCGCGCTCGCGGTCGTGCTCGGCGGCGACGTGTTCTGGTCGCTGATCGCGCTGCTGCTCGGGCAGCTGATCGGCGGTG CGGTGATGGCGCTGCACGGCGCGCAAGGGCCGCAACTCGGGCTGCCGCAAATGATTTCGAGCCGCGTCCAGTTCGGCGTG TACGGCGCGATGATCCCGATCGTGCTCGTGTGCCTGATGTACATCGGTTTTTCGGCGAGCGGCTCCGTGCTGGCGGGGCA GGCGGTCGCGCAGCTGCTGCACGTCGACGACGCGGCCGGCATCCTGCTGTTCGCGGCGGTGATCGTCGTGCTGACGGTGT GCGGCTATCGCGCGATCCACTTCGTCGGCCGCATTGCGAGCGTGATCGGCATCGTCGCGTTCGTCTACATGTTCGCGCAG CTGTTCGCGAACCACGACATCGGCGCGCTGCTCGCGAACCGGCATTTCACGCTCGCGAGCTTCCTGCTGTCGATGTCGCT GTCGGCATCGTGGCAGATCGCGTTCGGTCCGTACGTCGCCGACTACTCGCGCTATCTGCCGCGCTCGACGTCGTCGCTCG GCACGTTCTTCGCGGTGGGCCTCGGCTCGGTGATCGGCGCGCAGGCGGCCATGGTGTTCGGCGTGTTCGCGGCGGCGCTG GCCGGCAGCGGCTTCGCGCATCACGAAGTCGCGTACATCGTCGGCCTCGGTTCGACGGGCGCCGTGGCCGCGCTGCTGTA TTTCAGCATCGCGTTCGGCAAGGTCACGGTGACGGCGCTCAACGCGTACGGCAGCTTCATGTCGATGGCGACGATCGTCA GCGGCTTTCGCGGCAAGGGCGCGGTGTCGTCGCGCAGCCGGCTGCTGTACATCTTCGGGATGATCTGCGTCTCGACGCTG ATCGCGCTAGCCGGCCGCCATTCGTTCCTGAAGGAATTCACGGCCTTCATCCTGTTCCTGCTCGCGTTCTTCACGCCGTG GAGCGCGATCAATCTCGTCGACTACTACTGCTTCACGCGTTCGCGCTACGACGTGCCGGCGCTGTCCGATCCGGACGGCC GCTACGGCCGCTGGAACGCGATGGCGATCGCGATCTACGTGATCGGCATTCTCGTGCAGCTGCCGTTCATGTCGACGCAC GTCTATACGGGCCCGCTCGTCGATGCGCTCGGCGGCACCGACATCTCGTGGATTCTCGGCCTCGTCGTGCCGGCCGTGCT GTATTACGTCGGCGCGCGCGCGTCGCGTCGCAGCATTCCCGAACGCCTGATCCTGCCGCTCGAGCGCGGCGAAGCGCAGC CCTGA
Upstream 100 bases:
>100_bases CGCCTGCCCACACCGCACGATCTACACGCCTAAAAAAGCGGCGAAAGACGGGTATTTCCGGATATCAGACAAGTTGTATA TACAAGATCATGCGCTGGCA
Downstream 100 bases:
>100_bases CGGTGCGCATCGGGCCGGCATGCGTGCGGCCCGAGTTACCTACAGCGTGTGCACTGCGTCGCGCCTGCGTCGCTACTTCC CGAGCCGCTGCGCGAGCGAA
Product: cytosine/purines uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MLARVVPHARHRARRARRACMAPLGDPRRARRSAEPTARHVPRPVRTICRPESSGDLPVSTHPTGNAGGLIEVRSIDFIP DAERHGGLLSQFTLWLSANMQITAIVTGALAVVLGGDVFWSLIALLLGQLIGGAVMALHGAQGPQLGLPQMISSRVQFGV YGAMIPIVLVCLMYIGFSASGSVLAGQAVAQLLHVDDAAGILLFAAVIVVLTVCGYRAIHFVGRIASVIGIVAFVYMFAQ LFANHDIGALLANRHFTLASFLLSMSLSASWQIAFGPYVADYSRYLPRSTSSLGTFFAVGLGSVIGAQAAMVFGVFAAAL AGSGFAHHEVAYIVGLGSTGAVAALLYFSIAFGKVTVTALNAYGSFMSMATIVSGFRGKGAVSSRSRLLYIFGMICVSTL IALAGRHSFLKEFTAFILFLLAFFTPWSAINLVDYYCFTRSRYDVPALSDPDGRYGRWNAMAIAIYVIGILVQLPFMSTH VYTGPLVDALGGTDISWILGLVVPAVLYYVGARASRRSIPERLILPLERGEAQP
Sequences:
>Translated_534_residues MLARVVPHARHRARRARRACMAPLGDPRRARRSAEPTARHVPRPVRTICRPESSGDLPVSTHPTGNAGGLIEVRSIDFIP DAERHGGLLSQFTLWLSANMQITAIVTGALAVVLGGDVFWSLIALLLGQLIGGAVMALHGAQGPQLGLPQMISSRVQFGV YGAMIPIVLVCLMYIGFSASGSVLAGQAVAQLLHVDDAAGILLFAAVIVVLTVCGYRAIHFVGRIASVIGIVAFVYMFAQ LFANHDIGALLANRHFTLASFLLSMSLSASWQIAFGPYVADYSRYLPRSTSSLGTFFAVGLGSVIGAQAAMVFGVFAAAL AGSGFAHHEVAYIVGLGSTGAVAALLYFSIAFGKVTVTALNAYGSFMSMATIVSGFRGKGAVSSRSRLLYIFGMICVSTL IALAGRHSFLKEFTAFILFLLAFFTPWSAINLVDYYCFTRSRYDVPALSDPDGRYGRWNAMAIAIYVIGILVQLPFMSTH VYTGPLVDALGGTDISWILGLVVPAVLYYVGARASRRSIPERLILPLERGEAQP >Mature_534_residues MLARVVPHARHRARRARRACMAPLGDPRRARRSAEPTARHVPRPVRTICRPESSGDLPVSTHPTGNAGGLIEVRSIDFIP DAERHGGLLSQFTLWLSANMQITAIVTGALAVVLGGDVFWSLIALLLGQLIGGAVMALHGAQGPQLGLPQMISSRVQFGV YGAMIPIVLVCLMYIGFSASGSVLAGQAVAQLLHVDDAAGILLFAAVIVVLTVCGYRAIHFVGRIASVIGIVAFVYMFAQ LFANHDIGALLANRHFTLASFLLSMSLSASWQIAFGPYVADYSRYLPRSTSSLGTFFAVGLGSVIGAQAAMVFGVFAAAL AGSGFAHHEVAYIVGLGSTGAVAALLYFSIAFGKVTVTALNAYGSFMSMATIVSGFRGKGAVSSRSRLLYIFGMICVSTL IALAGRHSFLKEFTAFILFLLAFFTPWSAINLVDYYCFTRSRYDVPALSDPDGRYGRWNAMAIAIYVIGILVQLPFMSTH VYTGPLVDALGGTDISWILGLVVPAVLYYVGARASRRSIPERLILPLERGEAQP
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320903, Length=240, Percent_Identity=29.5833333333333, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320897, Length=266, Percent_Identity=25.9398496240602, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320902, Length=268, Percent_Identity=27.2388059701493, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 57024; Mature: 57024
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARVVPHARHRARRARRACMAPLGDPRRARRSAEPTARHVPRPVRTICRPESSGDLPVS CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCCCCC THPTGNAGGLIEVRSIDFIPDAERHGGLLSQFTLWLSANMQITAIVTGALAVVLGGDVFW CCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH SLIALLLGQLIGGAVMALHGAQGPQLGLPQMISSRVQFGVYGAMIPIVLVCLMYIGFSAS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GSVLAGQAVAQLLHVDDAAGILLFAAVIVVLTVCGYRAIHFVGRIASVIGIVAFVYMFAQ CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFANHDIGALLANRHFTLASFLLSMSLSASWQIAFGPYVADYSRYLPRSTSSLGTFFAVG HHCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHH LGSVIGAQAAMVFGVFAAALAGSGFAHHEVAYIVGLGSTGAVAALLYFSIAFGKVTVTAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEHH NAYGSFMSMATIVSGFRGKGAVSSRSRLLYIFGMICVSTLIALAGRHSFLKEFTAFILFL HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAFFTPWSAINLVDYYCFTRSRYDVPALSDPDGRYGRWNAMAIAIYVIGILVQLPFMSTH HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC VYTGPLVDALGGTDISWILGLVVPAVLYYVGARASRRSIPERLILPLERGEAQP CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHCCCCCC >Mature Secondary Structure MLARVVPHARHRARRARRACMAPLGDPRRARRSAEPTARHVPRPVRTICRPESSGDLPVS CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCCCCC THPTGNAGGLIEVRSIDFIPDAERHGGLLSQFTLWLSANMQITAIVTGALAVVLGGDVFW CCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH SLIALLLGQLIGGAVMALHGAQGPQLGLPQMISSRVQFGVYGAMIPIVLVCLMYIGFSAS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GSVLAGQAVAQLLHVDDAAGILLFAAVIVVLTVCGYRAIHFVGRIASVIGIVAFVYMFAQ CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFANHDIGALLANRHFTLASFLLSMSLSASWQIAFGPYVADYSRYLPRSTSSLGTFFAVG HHCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHH LGSVIGAQAAMVFGVFAAALAGSGFAHHEVAYIVGLGSTGAVAALLYFSIAFGKVTVTAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEHH NAYGSFMSMATIVSGFRGKGAVSSRSRLLYIFGMICVSTLIALAGRHSFLKEFTAFILFL HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAFFTPWSAINLVDYYCFTRSRYDVPALSDPDGRYGRWNAMAIAIYVIGILVQLPFMSTH HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC VYTGPLVDALGGTDISWILGLVVPAVLYYVGARASRRSIPERLILPLERGEAQP CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]