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The map label for this gene is 161525211

Identifier: 161525211

GI number: 161525211

Start: 2236072

End: 2237319

Strand: Direct

Name: 161525211

Synonym: Bmul_2041

Alternate gene names: NA

Gene position: 2236072-2237319 (Clockwise)

Preceding gene: 161525208

Following gene: 161525223

Centisome position: 64.84

GC content: 72.2

Gene sequence:

>1248_bases
ATGTGGTACGCACTCGTCGAGCAGCAGCGGGAATGGATGCGCGCGTGGCGCGATGCGACGCGCGACGCGTTCGATGCGTG
GCCGTCGGCGACGCTGCCGCACGCAGCGGCGTCGTGCTACGACGATCTGTTCGAGCCGCTCGTCGGCGCGCCGGCCGGGC
CGCCCGGCTTCGAGATCGGGCCGTTGACGCTCGACGGCCGCGACGTGGCGATCGACGAACGCGTCATCGCGCATACGGCG
TTCTGCGATCTGCGCCGCTTCGCGCGCGCGGACGCTTCGCGCACGGTGCTGCTGTGCGTGCCGCTCGCCGGTCATTCGGC
GGTGATGATGCGCGAGACGGTCGAGACGCTGCTCGCGGACGGCGACGTCTGCGTGACCGACTGGCTCAATGCGCGCGACG
TGCCGCTCGAGTGCGGCCGCTTCGGGCTCGACGAATATGTCGCGATGCTCGACGGCTTCATCGACGCGCTCGCACTCGGC
GGCCGTCCGCTGCACGTCGTCGCGGTGTGCCAGGCGACCGTGCCGGCGCTCGGCGCGCTCGCGCTGCGCGCGGTGCGCGG
GCTCGCGCCGCCGGCGAGTCTCACGCTGATCGGCGGGCCGCTCGATGCGCGGCTCAACCCGAGCACGCTCGGCACCGCCG
CGGCCGCCCATCCGCTCGAATGGTGCCGTCGCAATCTGATCGACATCGTGCCGCCCGGCTTCGCGGGACACGGCCGCCCC
GTATTCCCGACCTATCTGCAGCAAGGCGAGATCGCGCTCGTCTATCCGCAGCGCTTCCTGTCGCTGATGGAGGACTATGC
ACGCGCCGCGTCGCGCTTCGATCCGGCGGCGCTCGCGGCCGCGCGGCGCGCACTGCGCGAGTACACGGCACTGCTCGACA
TGCCGGCCGAATATGTCCTAGACACGATCGACGTCGTGTTCCAGCGGATGTGCATCGCGAACGGCACGTGGGAGGTCGGC
GGCCGATGCGTCGAGCCGGCCGCGCTGCGCGAGCTCGCGCTGCTGACCGTCGAAGGCGCGCGCGATGCCGTGACGGGCGC
GGGCCAGACGCATGCGGCGCTCGCGATGTGCAGCGGCCTCGACGCGCGCGACCGCCATCGCGCGGACATCGACGACTGCG
ATCACTACGGCCTCTTTTCCGGCGCGCACTGGCGCGACGACGTTCATCCGGCCCTGCAGCGGCTGTTCGCGCTCGCCGAA
GCGGCACGGCGGCGGCCGCATCGCGCGCGGGCGCTCAGACGGACCTGA

Upstream 100 bases:

>100_bases
GGCACACGGAATGCGCAGACTCCGGCCGCGAATTCGCCCACCGCTGGGCGCGCCCATTGACCATAATGCAGTGTCTACCC
GTTCCGCCGGAAGGTTCGCC

Downstream 100 bases:

>100_bases
CGTCGTCGTCCGGTCCGCGCGCCGCGTCGAGCAGCGCGCGCACTTCGTCGTCGTCGGTCTGCTCGAAGCGCGCGTAGAAC
TGGCTGATCCCGAAGAACGA

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MWYALVEQQREWMRAWRDATRDAFDAWPSATLPHAAASCYDDLFEPLVGAPAGPPGFEIGPLTLDGRDVAIDERVIAHTA
FCDLRRFARADASRTVLLCVPLAGHSAVMMRETVETLLADGDVCVTDWLNARDVPLECGRFGLDEYVAMLDGFIDALALG
GRPLHVVAVCQATVPALGALALRAVRGLAPPASLTLIGGPLDARLNPSTLGTAAAAHPLEWCRRNLIDIVPPGFAGHGRP
VFPTYLQQGEIALVYPQRFLSLMEDYARAASRFDPAALAAARRALREYTALLDMPAEYVLDTIDVVFQRMCIANGTWEVG
GRCVEPAALRELALLTVEGARDAVTGAGQTHAALAMCSGLDARDRHRADIDDCDHYGLFSGAHWRDDVHPALQRLFALAE
AARRRPHRARALRRT

Sequences:

>Translated_415_residues
MWYALVEQQREWMRAWRDATRDAFDAWPSATLPHAAASCYDDLFEPLVGAPAGPPGFEIGPLTLDGRDVAIDERVIAHTA
FCDLRRFARADASRTVLLCVPLAGHSAVMMRETVETLLADGDVCVTDWLNARDVPLECGRFGLDEYVAMLDGFIDALALG
GRPLHVVAVCQATVPALGALALRAVRGLAPPASLTLIGGPLDARLNPSTLGTAAAAHPLEWCRRNLIDIVPPGFAGHGRP
VFPTYLQQGEIALVYPQRFLSLMEDYARAASRFDPAALAAARRALREYTALLDMPAEYVLDTIDVVFQRMCIANGTWEVG
GRCVEPAALRELALLTVEGARDAVTGAGQTHAALAMCSGLDARDRHRADIDDCDHYGLFSGAHWRDDVHPALQRLFALAE
AARRRPHRARALRRT
>Mature_415_residues
MWYALVEQQREWMRAWRDATRDAFDAWPSATLPHAAASCYDDLFEPLVGAPAGPPGFEIGPLTLDGRDVAIDERVIAHTA
FCDLRRFARADASRTVLLCVPLAGHSAVMMRETVETLLADGDVCVTDWLNARDVPLECGRFGLDEYVAMLDGFIDALALG
GRPLHVVAVCQATVPALGALALRAVRGLAPPASLTLIGGPLDARLNPSTLGTAAAAHPLEWCRRNLIDIVPPGFAGHGRP
VFPTYLQQGEIALVYPQRFLSLMEDYARAASRFDPAALAAARRALREYTALLDMPAEYVLDTIDVVFQRMCIANGTWEVG
GRCVEPAALRELALLTVEGARDAVTGAGQTHAALAMCSGLDARDRHRADIDDCDHYGLFSGAHWRDDVHPALQRLFALAE
AARRRPHRARALRRT

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45202; Mature: 45202

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYALVEQQREWMRAWRDATRDAFDAWPSATLPHAAASCYDDLFEPLVGAPAGPPGFEIG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLTLDGRDVAIDERVIAHTAFCDLRRFARADASRTVLLCVPLAGHSAVMMRETVETLLAD
CEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC
GDVCVTDWLNARDVPLECGRFGLDEYVAMLDGFIDALALGGRPLHVVAVCQATVPALGAL
CCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
ALRAVRGLAPPASLTLIGGPLDARLNPSTLGTAAAAHPLEWCRRNLIDIVPPGFAGHGRP
HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
VFPTYLQQGEIALVYPQRFLSLMEDYARAASRFDPAALAAARRALREYTALLDMPAEYVL
CCHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
DTIDVVFQRMCIANGTWEVGGRCVEPAALRELALLTVEGARDAVTGAGQTHAALAMCSGL
HHHHHHHHHHHHCCCCHHCCCEECCHHHHHHHHHHEECCCHHHHCCCCCHHHHHHHHCCC
DARDRHRADIDDCDHYGLFSGAHWRDDVHPALQRLFALAEAARRRPHRARALRRT
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MWYALVEQQREWMRAWRDATRDAFDAWPSATLPHAAASCYDDLFEPLVGAPAGPPGFEIG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLTLDGRDVAIDERVIAHTAFCDLRRFARADASRTVLLCVPLAGHSAVMMRETVETLLAD
CEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC
GDVCVTDWLNARDVPLECGRFGLDEYVAMLDGFIDALALGGRPLHVVAVCQATVPALGAL
CCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
ALRAVRGLAPPASLTLIGGPLDARLNPSTLGTAAAAHPLEWCRRNLIDIVPPGFAGHGRP
HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
VFPTYLQQGEIALVYPQRFLSLMEDYARAASRFDPAALAAARRALREYTALLDMPAEYVL
CCHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
DTIDVVFQRMCIANGTWEVGGRCVEPAALRELALLTVEGARDAVTGAGQTHAALAMCSGL
HHHHHHHHHHHHCCCCHHCCCEECCHHHHHHHHHHEECCCHHHHCCCCCHHHHHHHHCCC
DARDRHRADIDDCDHYGLFSGAHWRDDVHPALQRLFALAEAARRRPHRARALRRT
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA